Center for Neurobehavioral Genetics

On average, our predoctoral trainees publish 1 article within the length of their training at UCLA while our postdoctoral trainees publish 3 articles.​

Read
Comprehensive cell type decomposition of circulating cell-free DNA with CelFiE” in Nature Communications

(2018-20 Trainee Christa Caggiano,
1st author)

Read
Brain gene co-expression networks link complement signaling with convergent synaptic pathology in schizophrenia” in
Nature Neuroscience

(2019-21 Trainee Minsoo Kim, 1st author)

 

Publications by Predoctoral Trainees

Appointed 2021 - Present

Kim M, Haney JR, Zhang P, Hernandez LM, Wang LK, Perez-Cano L, Loohuis LMO, de la Torre-Ubieta L, Gandal MJ. Brain gene co-expression networks link complement signaling with convergent synaptic pathology in schizophrenia. Nat Neurosci. 2021 Jun;24(6):799-809. doi: 10.1038/s41593-021-00847-z. Epub 2021 May 6. PMID: 33958802; PMCID: PMC8178202.

Appointed 2016 - 2020

Caggiano C, Celona B, Garton F, Mefford J, Black BL, Henderson R, Lomen-Hoerth C, Dahl A, Zaitlen N. Comprehensive cell type decomposition of circulating cell-free DNA with CelFiE. Nat Commun. 2021 May 11;12(1):2717. doi: 10.1038/s41467-021-22901-x. PMID: 33976150; PMCID: PMC8113516.

Van Paemel R, De Koker A, Caggiano C, Morlion A, Mestdagh P, De Wilde B, Vandesompele J, De Preter K. Genome-wide study of the effect of blood collection tubes on the cell-free DNA methylome. Epigenetics. 2021 Jun-Jul;16(7):797-807. doi: 10.1080/15592294.2020.1827714. Epub 2020 Oct 19. PMID: 33074045; PMCID: PMC8216177.

Service SK, Vargas Upegui C, Castaño Ramírez M, Port AM, Moore TM, Munoz Umanes M, Agudelo Arango LG, Díaz-Zuluaga AM, Melo Espejo J, López MC, Palacio JD, Ruiz Sánchez S, Valencia J, Teshiba TM, Espinoza A, Olde Loohuis L, De la Hoz Gomez J, Brodey BB, Sabatti C, Escobar JI, Reus VI, Lopez Jaramillo C, Gur RC, Bearden CE, Freimer NB. Distinct and shared contributions of diagnosis and symptom domains to cognitive performance in severe mental illness in the Paisa population: a case-control study. Lancet Psychiatry. 2020 May;7(5):411-419. doi: 10.1016/S2215-0366(20)30098-5. PMID: 32353276.

Cantor RM, Navarro L, Won H, Walker RL, Lowe JK, Geschwind DH.
ASD restricted and repetitive behaviors associated at 17q21.33: genes prioritized by expression in fetal brains. Mol Psychiatry. 2018 Apr;23(4):993-1000. doi: 10.1038/mp.2017.114. PMID: 28533516; PMCID: PMC5700871
Gandal MJ, Zhang P, Hadjimichael E, Walker RL, Chen C, Liu S, Won H, van Bakel H, Varghese M, Wang Y, Shieh AW, Haney J, Parhami S, Belmont J, Kim M, Moran Losada P, Khan Z, Mleczko J, Xia Y, Dai R, Wang D, Yang YT, Xu M, Fish K, Hof PR, Warrell J, Fitzgerald D, White K, Jaffe AE; Peters MA, Gerstein M, Liu C, Iakoucheva LM, Pinto D, Geschwind DH. Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder. Science. 2018 Dec 14;362(6420):eaat8127. doi: 10.1126/science.aat8127. PMID: 30545856; PMCID: PMC6443102.

Walker RL, Ramaswami G, Hartl C, Mancuso N, Gandal MJ, de la Torre-Ubieta L, Pasaniuc B, Stein JL, Geschwind DH. Genetic Control of Expression and Splicing in Developing Human Brain Informs Disease Mechanisms. Cell. 2019 Oct 17;179(3):750-771.e22. doi: 10.1016/j.cell.2019.09.021. PMID: 31626773. PMCID in progress\

Freund MK, Burch KS, Shi H, Mancuso N, Kichaev G, Garske KM, Pan DZ, Miao Z, Mohlke KL, Laakso M, Pajukanta P, Pasaniuc B, Arboleda VA. Phenotype-Specific Enrichment of Mendelian Disorder Genes near GWAS Regions across 62 Complex Traits. Am J Hum Genet. 2018 Oct 4;103(4):535-552. doi: 10.1016/j.ajhg.2018.08.017. PMID: 30290150; PMCID: PMC6174356.

Li J, Khankan RR, Caneda C, Godoy MI, Haney MS, Krawczyk MC, Bassik MC, Sloan SA, Zhang Y. Astrocyte-to-astrocyte contact and a positive feedback loop of growth factor signaling regulate astrocyte maturation. Version 2. Glia. 2019 Aug;67(8):1571-1597. doi: 10.1002/glia.23630. Epub 2019 Apr 29. PMID: 31033049; PMCID: PMC6557696.

Zou J, Hormozdiari F, Jew B, Castel SE, Lappalainen T, Ernst J, Sul JH, Eskin E. Leveraging allelic imbalance to refine fine-mapping for eQTL studies. PLoS Genet. 2019 Dec 13;15(12):e1008481. doi: 10.1371/journal.pgen.1008481. PMID: 31834882; PMCID: PMC6952111.

Cooke EK, White SA. Learning in the time of COVID: insights from the zebra finch – a social vocal-learner. Curr Opin Neurobiol. 2021 Jun;68:84-90. doi: 10.1016/j.conb.2021.01.004. Epub 2021 Feb 8. PMID: 33571938.

 

 

Appointed 2011 - 2015

Lin A, Ching CRK, Vajdi A, Sun D, Jonas RK, Jalbrzikowski M, Kushan-Wells L, Pacheco Hansen L, Krikorian E, Gutman B, Dokoru D, Helleman G, Thompson PM, Bearden CE. Mapping 22q11.2 Gene Dosage Effects on Brain Morphometry. J Neurosci. 2017 Jun 28;37(26):6183-6199. doi: 10.1523/JNEUROSCI.3759-16.2017. Epub 2017 May 23. PMID: 28536274; PMCID: PMC6705695.

Frohlich J, Senturk D, Saravanapandian V, Golshani P, Reiter LT, Sankar R, Thibert RL, DiStefano C, Huberty S, Cook EH, Jeste SS. A Quantitative Electrophysiological Biomarker of Duplication 15q11.2-q13.1 Syndrome. PLoS One. 2016 Dec 15;11(12):e0167179. doi: 10.1371/journal.pone.0167179. PMID: 27977700; PMCID: PMC5157977.

Akin O, Bajar BT, Keles MF, Frye MA, Zipursky SL. Cell-type-Specific Patterned Stimulus-Independent Neuronal Activity in the Drosophila Visual System during Synapse Formation. Neuron. 2019 Mar 6;101(5):894-904.e5. doi: 10.1016/j.neuron.2019.01.008. Epub 2019 Jan 30. PMID: 30711355; PMCID: PMC6437771.

Burkett ZD, Day NF, Kimball TH, Aamodt CM, Heston JB, Hilliard AT, Xiao X, White SA. FoxP2 isoforms delineate spatiotemporal transcriptional networks for vocal learning in the zebra finch. Elife. 2018 Jan 23;7:e30649. doi: 10.7554/eLife.30649. PMID: 29360038; PMCID: PMC5826274.

Aamodt CM, Farias-Virgens M, White SA. Birdsong as a window into language origins and evolutionary neuroscience. Philos Trans R Soc Lond B Biol Sci. 2020 Jan 6;375(1789):20190060. doi: 10.1098/rstb.2019.0060. Epub 2019 Nov 18. Erratum in: Philos Trans R Soc Lond B Biol Sci. 2020 Mar 2;375(1793):20190748. PMID: 31735151; PMCID: PMC6895547.

Tuosto K, Johnston JT, Connolly C, Lo C, Sanganyado E, Winter KA, Roembke T, Richter WE, Isaacson KJ, Raitor M, Kosanic A, Bessone L, Heim AB, Srivastava P, Hughes PW, Aamodt CM. Making science accessible. Science. 2020 Jan 3;367(6473):34-35. doi: 10.1126/science.aba6129. PMID: 31896709.

Aamodt CM, Farias-Virgens M, White SA. Correction to ‘Birdsong as a window into language origins and evolutionary neuroscience’. Philos Trans R Soc Lond B Biol Sci. 2020 Mar 2;375(1793):20190748. doi: 10.1098/rstb.2019.0748. Epub 2020 Jan 13. Erratum for: Philos Trans R Soc Lond B Biol Sci. 2020 Jan 6;375(1789):20190060. PMID: 31928184; PMCID: PMC7017427.

Douglas PK, Gutman B, Anderson A, Larios C, Lawrence KE, Narr K, Sengupta B, Cooray G, Douglas DB, Thompson PM, McGough JJ, Bookheimer SY. Hemispheric brain asymmetry differences in youths with attention-deficit/hyperactivity disorder. Neuroimage Clin. 2018 Feb 24;18:744-752. doi: 10.1016/j.nicl.2018.02.020. PMID: 29876263; PMCID: PMC5988460.

Rangaprakash D, Bohon C, Lawrence KE, Moody T, Morfini F, Khalsa SS, Strober M, Feusner JD. Aberrant Dynamic Connectivity for Fear Processing in Anorexia Nervosa and Body Dysmorphic Disorder. Front Psychiatry. 2018 Jun 26;9:273. doi: 10.3389/fpsyt.2018.00273. PMID: 29997532; PMCID: PMC6028703.

Lawrence KE, Hernandez LM, Bookheimer SY, Dapretto M. Atypical longitudinal development of functional connectivity in adolescents with autism spectrum disorder. Autism Res. 2019 Jan;12(1):53-65. doi: 10.1002/aur.1971. Epub 2018 Oct 30. PMCID: PMC6325013.

Green SA, Hernandez L, Lawrence KE, Liu J, Tsang T, Yeargin J, Cummings K, Laugeson E, Dapretto M, Bookheimer SY. Distinct Patterns of Neural Habituation and Generalization in Children and Adolescents With Autism With Low and High Sensory Overresponsivity. Am J Psychiatry. 2019 Dec 1;176(12):1010-1020. doi: 10.1176/appi.ajp.2019.18121333. Epub 2019 Jun 24. PMID: 31230465; PMCID: PMC6889004.

Hernandez LM, Lawrence KE, Padgaonkar NT, Inada M, Hoekstra JN, Lowe JK, Eilbott J, Jack A, Aylward E, Gaab N, Van Horn JD, Bernier RA, McPartland JC, Webb SJ, Pelphrey KA, Green SA, Geschwind DH, Bookheimer SY, Dapretto M. Imaging-genetics of sex differences in ASD: distinct effects of OXTR variants on brain connectivity. Transl Psychiatry. 2020 Mar 3;10(1):82. doi: 10.1038/s41398-020-0750-9. PMID: 32127526. PMCID: PMC7054353.

Hernandez LM, Green SA, Lawrence KE, Inada M, Liu J, Bookheimer SY, Dapretto M. Social Attention in Autism: Neural Sensitivity to Speech Over Background Noise Predicts Encoding of Social Information. Front Psychiatry. 2020 Apr 24;11:343. doi: 10.3389/fpsyt.2020.00343. eCollection 2020. PMID: 32390890. PMCID: PMC7194032.

Lawrence KE, Hernandez LM, Eilbott J, Jack A, Aylward E, Gaab N, Van Horn JD, Bernier RA, Geschwind DH, McPartland JC, Nelson CA, Webb SJ, Pelphrey KA, Bookheimer SY, Dapretto M. Neural responsivity to social rewards in autistic female youth. Transl Psychiatry. 2020 Jun 2;10(1):178. doi: 10.1038/s41398-020-0824-8. PMID: 32488083. PMCID: PMC7266816.

Frohlich J, Van Horn JD. Reviewing the ketamine model for schizophrenia. J Psychopharmacol. 2014 Apr;28(4):287-302. doi: 10.1177/0269881113512909. Epub 2013 Nov 20. PMID: 24257811; PMCID: PMC4133098.

Frohlich J, Irimia A, Jeste SS. Trajectory of frequency stability in typical
development. Brain Imaging Behav. 2015 Mar;9(1):5-18. PMCID: PMC4385521.

Jeste SS, Frohlich J, Loo SK. Electrophysiological biomarkers of diagnosis and outcome in neurodevelopmental disorders. Curr Opin Neurol. 2015 Apr;28(2):110-6. doi: 10.1097/WCO.0000000000000181. PMID: 25710286.

Mohammad-Rezazadeh I, Frohlich J, Loo SK, Jeste SS. Brain connectivity in autism spectrum disorder. Curr Opin Neurol. 2016 Apr;29(2):137-47. doi:
10.1097/WCO.0000000000000301. PMCID: PMC4843767.

Frohlich J, Senturk D, Saravanapandian V, Golshani P, Reiter LT, Sankar R, Thibert RL, DiStefano C, Huberty S, Cook EH, Jeste SS. A Quantitative Electrophysiological Biomarker of Duplication 15q11.2-q13.1 Syndrome. PLoS One. 2016 Dec 15;11(12):e0167179. doi: 10.1371/journal.pone.0167179. PMID: 27977700; PMCID: PMC5157977.

Frohlich J, Miller MT, Bird LM, Garces P, Purtell H, Hoener MC, Philpot BD, Sidorov MS, Tan WH, Hernandez MC, Rotenberg A, Jeste SS, Krishnan M, Khwaja O, Hipp JF. Electrophysiological Phenotype in Angelman Syndrome Differs Between Genotypes. Biol Psychiatry. 2019 May 1;85(9):752-759. doi: 10.1016/j.biopsych.2019.01.008. Epub 2019 Jan 19. PMID: 30826071; PMCID: PMC6482952.

Frohlich J, Reiter LT, Saravanapandian V, DiStefano C, Huberty S, Hyde C, Chamberlain S, Bearden CE, Golshani P, Irimia A, Olsen RW, Hipp JF, Jeste SS. Mechanisms underlying the EEG biomarker in Dup15q syndrome. Mol Autism. 2019 Jul 3;10:29. doi: 10.1186/s13229-019-0280-6. Erratum in: Mol Autism. 2019 Nov 6;10:37. PMID: 31312421; PMCID: PMC6609401.

Trinder M, DeCastro ML, Azizi H, Cermakova L, Jackson LM, Frohlich J, Mancini GBJ, Francis GA, Brunham LR. Ascertainment Bias in the Association Between Elevated Lipoprotein(a) and Familial Hypercholesterolemia. J Am Coll Cardiol. 2020 Jun 2;75(21):2682-2693. doi: 10.1016/j.jacc.2020.03.065. PMID: 32466883; PMCID pending.

Swartz EW, Baek J, Pribadi M, Wojta KJ, Almeida S, Karydas A, Gao FB, Miller BL, Coppola G. A Novel Protocol for Directed Differentiation of C9orf72-Associated Human Induced Pluripotent Stem Cells Into Contractile Skeletal Myotubes. Stem Cells Transl Med. 2016 Nov;5(11):1461-1472. doi: 10.5966/sctm.2015-0340. Epub 2016 Jul 1. PMID: 27369896; PMCID: PMC5070503.

Das R, Melo JA, Thondamal M, Morton EA, Cornwell AB, Crick B, Kim JH, Swartz EW, Lamitina T, Douglas PM, Samuelson AV. The homeodomain-interacting protein kinase HPK-1 preserves protein homeostasis and longevity through master regulatory control of the HSF-1 chaperone network and TORC1-restricted autophagy in Caenorhabditis elegans. PLoS Genet. 2017 Oct 16;13(10):e1007038. doi: 10.1371/journal.pgen.1007038. PMID: 29036198; PMCID: PMC5658188.

Rudie JD, Shehzad Z, Hernandez LM, Colich NL, Bookheimer SY, Iacoboni M, Dapretto M. Reduced functional integration and segregation of distributed neural systems underlying social and emotional information processing in autism spectrum disorders. Cereb Cortex. 2012 May;22(5):1025-37. doi: 10.1093/cercor/bhr171. Epub 2011 Jul 22. PMID: 21784971; PMCID: PMC3328339.

Rudie JD, Hernandez LM, Brown JA, Beck-Pancer D, Colich NL, Gorrindo P, Thompson PM, Geschwind DH, Bookheimer SY, Levitt P, Dapretto M. Autism-associated promoter variant in MET impacts functional and structural brain networks. Neuron. 2012 Sep 6;75(5):904-15. doi: 10.1016/j.neuron.2012.07.010. PMID: 22958829; PMCID: PMC3454529.

Rudie JD, Brown JA, Beck-Pancer D, Hernandez LM, Dennis EL, Thompson PM, Bookheimer SY, Dapretto M. Altered functional and structural brain network organization in autism. Neuroimage Clin. 2012 Nov 16;2:79-94. doi: 10.1016/j.nicl.2012.11.006. PMID: 24179761; PMCID: PMC3777708.

Colich NL, Wang AT, Rudie JD, Hernandez LM, Bookheimer SY, Dapretto M. Atypical Neural Processing of Ironic and Sincere Remarks in Children and Adolescents with Autism Spectrum Disorders. Metaphor Symb. 2012;27(1):70-92. doi: 10.1080/10926488.2012.638856. PMID: 24497750; PMCID: PMC3909704.

Pfeifer JH, Merchant JS, Colich NL, Hernandez LM, Rudie JD, Dapretto M. Neural and behavioral responses during self-evaluative processes differ in youth with and without autism. J Autism Dev Disord. 2013 Feb;43(2):272-85. doi: 10.1007/s10803-012-1563-3. PMID: 22760337; PMCID: PMC3507334.

Green SA, Rudie JD, Colich NL, Wood JJ, Shirinyan D, Hernandez L, Tottenham N, Dapretto M, Bookheimer SY. Overreactive brain responses to sensory stimuli in youth with autism spectrum disorders. J Am Acad Child Adolesc Psychiatry. 2013 Nov;52(11):1158-72. doi: 10.1016/j.jaac.2013.08.004. Epub 2013 Aug 24. PMID: 24157390; PMCID: PMC3820504.

Moses P, Hernandez LM, Orient E. Age-related differences in cerebral blood flow underlie the BOLD fMRI signal in childhood. Front Psychol. 2014 Apr 16;5:300. doi: 10.3389/fpsyg.2014.00300. PMID: 24795666; PMCID: PMC3997021.

Hernandez LM, Rudie JD, Green SA, Bookheimer S, Dapretto M. Neural signatures of autism spectrum disorders: insights into brain network dynamics. Neuropsychopharmacology. 2015 Jan;40(1):171-89. doi: 10.1038/npp.2014.172. Epub 2014 Jul 11. PMID: 25011468; PMCID: PMC4262896.

Green SA, Hernandez L, Tottenham N, Krasileva K, Bookheimer SY, Dapretto M. Neurobiology of Sensory Overresponsivity in Youth With Autism Spectrum Disorders. JAMA Psychiatry. 2015 Aug;72(8):778-86. doi: 10.1001/jamapsychiatry.2015.0737. PMID: 26061819; PMCID: PMC4861140.

Jann K, Hernandez LM, Beck-Pancer D, McCarron R, Smith RX, Dapretto M, Wang DJ. Altered resting perfusion and functional connectivity of default mode network in youth with autism spectrum disorder. Brain Behav. 2015 Sep;5(9):e00358. doi: 10.1002/brb3.358. Epub 2015 Jun 25. PMID: 26445698; PMCID: PMC4589806.

Sherman LE, Payton AA, Hernandez LM, Greenfield PM, Dapretto M. The Power of the Like in Adolescence: Effects of Peer Influence on Neural and Behavioral Responses to Social Media. Version 2. Psychol Sci. 2016 Jul;27(7):1027-35. doi: 10.1177/0956797616645673. Epub 2016 May 31. PMID: 27247125; PMCID: PMC5387999.

Hernandez LM, Krasileva K, Green SA, Sherman LE, Ponting C, McCarron R, Lowe JK, Geschwind DH, Bookheimer SY, Dapretto M. Additive effects of oxytocin receptor gene polymorphisms on reward circuitry in youth with autism. Mol Psychiatry. 2017 Aug;22(8):1134-1139. doi: 10.1038/mp.2016.209. Epub 2016 Nov 15. PMID: 27843152; PMCID: PMC5991611.

Green SA, Hernandez LM, Bowman HC, Bookheimer SY, Dapretto M. Sensory over-responsivity and social cognition in ASD: Effects of aversive sensory stimuli and attentional modulation on neural responses to social cues. Version 2. Dev Cogn Neurosci. 2018 Jan;29:127-139. doi: 10.1016/j.dcn.2017.02.005. Epub 2017 Feb 21. PMID: 28284787; PMCID: PMC5990012.

Green SA, Hernandez L, Bookheimer SY, Dapretto M. Reduced modulation of thalamocortical connectivity during exposure to sensory stimuli in ASD. Autism Res. 2017 May;10(5):801-809. doi: 10.1002/aur.1726. Epub 2016 Nov 29. PMID: 27896947; PMCID: PMC5444966.

Sherman LE, Greenfield PM, Hernandez LM, Dapretto M. Peer Influence Via Instagram: Effects on Brain and Behavior in Adolescence and Young Adulthood. Child Dev. 2018 Jan;89(1):37-47. doi: 10.1111/cdev.12838. Epub 2017 Jun 14. PMID: 28612930; PMCID: PMC5730501.

Lawrence KE, Hernandez LM, Bookheimer SY, Dapretto M. Atypical longitudinal development of functional connectivity in adolescents with autism spectrum disorder. Autism Res. 2019 Jan;12(1):53-65. doi: 10.1002/aur.1971. Epub 2018 Oct 30. PMID: 30375176; PMCID: PMC6325013.

He CX, Arroyo ED, Cantu DA, Goel A, Portera-Cailliau C. A Versatile Method for Viral Transfection of Calcium Indicators in the Neonatal Mouse Brain. Front Neural Circuits. 2018 Jul 23;12:56. doi: 10.3389/fncir.2018.00056. PMID: 30083093; PMCID: PMC6064716.

Ricard C, Arroyo ED, He CX, Portera-Cailliau C, Lepousez G, Canepari M, Fiole D. Two-photon probes for in vivo multicolor microscopy of the structure and signals of brain cells. Brain Struct Funct. 2018 Sep;223(7):3011-3043. doi: 10.1007/s00429-018-1678-1. Epub 2018 May 11. PMID: 29748872; PMCID: PMC6119111.

Arroyo ED, Fiole D, Mantri SS, Huang C, Portera-Cailliau C. Dendritic Spines in Early Postnatal Fragile X Mice Are Insensitive to Novel Sensory Experience. J Neurosci. 2019 Jan 16;39(3):412-419. doi: 10.1523/JNEUROSCI.1734-18.2018. Epub 2018 Dec 6. PMID: 30523064; PMCID: PMC6335755.

He Q, Arroyo ED, Smukowski SN, Xu J, Piochon C, Savas JN, Portera-Cailliau C, Contractor A. Critical period inhibition of NKCC1 rectifies synapse plasticity in the somatosensory cortex and restores adult tactile response maps in fragile X mice. Mol Psychiatry. 2019 Nov;24(11):1732-1747. doi: 10.1038/s41380-018-0048-y. Epub 2018 Apr 27. PMID: 29703945; PMCID: PMC6204122.

Cantu DA, Wang B, Gongwer MW, He CX, Goel A, Suresh A, Kourdougli N, Arroyo ED, Zeiger W, Portera-Cailliau C. EZcalcium: Open-Source Toolbox for Analysis of Calcium Imaging Data. Front Neural Circuits. 2020 May 15;14:25. doi: 10.3389/fncir.2020.00025. PMID: 32499682; PMCID: PMC7244005.

Harrison TM, Bookheimer SY. Neuroimaging genetic risk for Alzheimer’s disease in preclinical individuals: From candidate genes to polygenic approaches. Biol Psychiatry Cogn Neurosci Neuroimaging. 2016 Jan 1;1(1):14-23. doi: 10.1016/j.bpsc.2015.09.003. PMID: 26858991; PMCID: PMC4743051.

Harrison TM, Burggren AC, Small GW, Bookheimer SY. Altered memory-related functional connectivity of the anterior and posterior hippocampus in older adults at increased genetic risk for Alzheimer’s disease. Hum Brain Mapp. 2016 Jan;37(1):366-80. doi: 10.1002/hbm.23036. Epub 2015 Oct 27. PMID: 26503161; PMCID: PMC4715627.

Harrison TM, Mahmood Z, Lau EP, Karacozoff AM, Burggren AC, Small GW, Bookheimer SY. An Alzheimer’s Disease Genetic Risk Score Predicts Longitudinal Thinning of Hippocampal Complex Subregions in Healthy Older Adults. eNeuro. 2016 Jul 15;3(3):ENEURO.0098-16.2016. doi: 10.1523/ENEURO.0098-16.2016. PMID: 27482534; PMCID: PMC4945997.

Burggren AC, Mahmood Z, Harrison TM, Siddarth P, Miller KJ, Small GW, Merrill DA, Bookheimer SY. Hippocampal thinning linked to longer TOMM40 poly-T variant lengths in the absence of the APOE ε4 variant. Alzheimers Dement. 2017 Jul;13(7):739-748. doi: 10.1016/j.jalz.2016.12.009. Epub 2017 Feb 7. PMID: 28183529; PMCID: PMC5496778.

Appointed 2006 - 2010

Xin H, Lee D, Hormozdiari F, Yedkar S, Mutlu O, Alkan C. Accelerating read mapping with FastHASH. BMC Genomics. 2013;14 Suppl 1(Suppl 1):S13. doi: 10.1186/1471-2164-14-S1-S13. Epub 2013 Jan 21. PMID: 23369189; PMCID: PMC3549798.

Hormozdiari F, Kostem E, Kang EY, Pasaniuc B, Eskin E. Identifying causal variants at loci with multiple signals of association. Genetics. 2014 Oct;198(2):497-508. doi: 10.1534/genetics.114.167908. Epub 2014 Aug 7. PMID: 25104515; PMCID: PMC4196608.

Hormozdiari F, Kichaev G, Yang WY, Pasaniuc B, Eskin E. Identification of causal genes for complex traits. Bioinformatics. 2015 Jun 15;31(12):i206-13. doi: 10.1093/bioinformatics/btv240. PMID: 26072484; PMCID: PMC4542778.

Won H, de la Torre-Ubieta L, Stein JL, Parikshak NN, Huang J, Opland CK, Gandal MJ, Sutton GJ, Hormozdiari F, Lu D, Lee C, Eskin E, Voineagu I, Ernst J, Geschwind DH. Chromosome conformation elucidates regulatory relationships in developing human brain. Nature. 2016 Oct 27;538(7626):523-527. doi: 10.1038/nature19847. Epub 2016 Oct 19. PMID: 27760116; PMCID: PMC5358922.

Hormozdiari F, van de Bunt M, Segrè AV, Li X, Joo JWJ, Bilow M, Sul JH, Sankararaman S, Pasaniuc B, Eskin E. Colocalization of GWAS and eQTL Signals Detects Target Genes. Am J Hum Genet. 2016 Dec 1;99(6):1245-1260. doi: 10.1016/j.ajhg.2016.10.003. Epub 2016 Nov 17. PMID: 27866706; PMCID: PMC5142122.

Voineagu I, Huang L, Winden K, Lazaro M, Haan E, Nelson J, McGaughran J, Nguyen LS, Friend K, Hackett A, Field M, Gecz J, Geschwind D. CCDC22: a novel candidate gene for syndromic X-linked intellectual disability. Mol Psychiatry. 2012 Jan;17(1):4-7. doi: 10.1038/mp.2011.95. Epub 2011 Aug 9. PMID: 21826058; PMCID: PMC3586744.

Garcia-Junco-Clemente P, Chow DK, Tring E, Lazaro MT, Trachtenberg JT, Golshani P. Overexpression of calcium-activated potassium channels underlies cortical dysfunction in a model of PTEN-associated autism. Proc Natl Acad Sci U S A. 2013 Nov 5;110(45):18297-302. doi: 10.1073/pnas.1309207110. Epub 2013 Oct 21. PMID: 24145404; PMCID: PMC3831440.

Peñagarikano O, Lazaro MT, Lu XH, Gordon A, Dong H, Lam HA, Peles E, Maidment NT, Murphy NP, Yang XW, Golshani P, Geschwind DH. Exogenous and evoked oxytocin restores social behavior in the Cntnap2 mouse model of autism. Sci Transl Med. 2015 Jan 21;7(271):271ra8. doi: 10.1126/scitranslmed.3010257. PMID: 25609168; PMCID: PMC4498455.

Lazaro MT, Golshani P. The utility of rodent models of autism spectrum disorders. Curr Opin Neurol. 2015 Apr;28(2):103-9. doi: 10.1097/WCO.0000000000000183. PMID: 25734952; PMCID: PMC4476903.

Gdalyahu A, Lazaro M, Penagarikano O, Golshani P, Trachtenberg JT, Geschwind DH. The Autism Related Protein Contactin-Associated Protein-Like 2 (CNTNAP2) Stabilizes New Spines: An In Vivo Mouse Study. PLoS One. 2015 May 7;10(5):e0125633. doi: 10.1371/journal.pone.0125633. Erratum in: PLoS One. 2015;10(5):e0129638. Gescwind, Daniel H [corrected to Geschwind, Daniel H]. PMID: 25951243; PMCID: PMC4423902.

Lazaro MT, Taxidis J, Shuman T, Bachmutsky I, Ikrar T, Santos R, Marcello GM, Mylavarapu A, Chandra S, Foreman A, Goli R, Tran D, Sharma N, Azhdam M, Dong H, Choe KY, Peñagarikano O, Masmanidis SC, Rácz B, Xu X, Geschwind DH, Golshani P. Reduced Prefrontal Synaptic Connectivity and Disturbed Oscillatory Population Dynamics in the CNTNAP2 Model of Autism. Cell Rep. 2019 May 28;27(9):2567-2578.e6. doi: 10.1016/j.celrep.2019.05.006. PMID: 31141683; PMCID: PMC6553483.

Williams ME, Wilke SA, Daggett A, Davis E, Otto S, Ravi D, Ripley B, Bushong EA, Ellisman MH, Klein G, Ghosh A. Cadherin-9 regulates synapse-specific differentiation in the developing hippocampus. Neuron. 2011 Aug 25;71(4):640-55. doi: 10.1016/j.neuron.2011.06.019. PMID: 21867881; PMCID: PMC3272880.

Daggett A, Yang XW. Huntington’s disease: easing the NMDAR traffic jam. Nat Med. 2013 Aug;19(8):971-3. doi: 10.1038/nm.3283. PMID: 23921742.

Thomason ME, Dennis EL, Joshi AA, Joshi SH, Dinov ID, Chang C, Henry ML, Johnson RF, Thompson PM, Toga AW, Glover GH, Van Horn JD, Gotlib IH. Resting-state fMRI can reliably map neural networks in children. Neuroimage. 2011 Mar 1;55(1):165-75. doi: 10.1016/j.neuroimage.2010.11.080. Epub 2010 Dec 4. PMID: 21134471; PMCID: PMC3031732.

Dennis EL, Jahanshad N, Rudie JD, Brown JA, Johnson K, McMahon KL, de Zubicaray GI, Montgomery G, Martin NG, Wright MJ, Bookheimer SY, Dapretto M, Toga AW, Thompson PM. Altered structural brain connectivity in healthy carriers of the autism risk gene, CNTNAP2. Version 2. Brain Connect. 2011;1(6):447-59. doi: 10.1089/brain.2011.0064. Erratum in: Brain Connect. 2012;2(6):356. PMID: 22500773; PMCID: PMC3420970.

Dennis EL, Gotlib IH, Thompson PM, Thomason ME. Anxiety modulates insula recruitment in resting-state functional magnetic resonance imaging in youth and adults. Brain Connect. 2011;1(3):245-54. doi: 10.1089/brain.2011.0030. PMID: 22433052; PMCID: PMC3621677.

Daianu M, Jahanshad N, Dennis EL, Toga AW, McMahon KL, de Zubicaray GI, Martin NG, Wright MJ, Hickie IB, Thompson PM. LEFT VERSUS RIGHT HEMISPHERE DIFFERENCES IN BRAIN CONNECTIVITY: 4-TESLA HARDI TRACTOGRAPHY IN 569 TWINS. Proc IEEE Int Symp Biomed Imaging. 2012 May;2012:526-529. doi: 10.1109/ISBI.2012.6235601. PMID: 25404993; PMCID: PMC4232939.

Rudie JD, Brown JA, Beck-Pancer D, Hernandez LM, Dennis EL, Thompson PM, Bookheimer SY, Dapretto M. Altered functional and structural brain network organization in autism. Neuroimage Clin. 2012 Nov 16;2:79-94. doi: 10.1016/j.nicl.2012.11.006. PMID: 24179761; PMCID: PMC3777708.

Dennis EL, Jahanshad N, Toga AW, McMahon KL, de Zubicaray GI, Martin NG, Wright MJ, Thompson PM. Test-retest reliability of graph theory measures of structural brain connectivity. Med Image Comput Comput Assist Interv. 2012;15(Pt 3):305-12. doi: 10.1007/978-3-642-33454-2_38. PMID: 23286144; PMCID: PMC4039303.

Dennis EL, Jahanshad N, Toga AW, Johnson K, McMahon KL, de Zubicaray GI, Martin NG, Hickie IB, Wright MJ, Thompson PM. CHANGES IN ANATOMICAL BRAIN CONNECTIVITY BETWEEN AGES 12 AND 30: A HARDI STUDY OF 467 ADOLESCENTS AND ADULTS. Proc IEEE Int Symp Biomed Imaging. 2012:904-908. doi: 10.1109/ISBI.2012.6235695. PMID: 22903354; PMCID: PMC3420974.

Dennis EL, Jahanshad N, McMahon KL, de Zubicaray GI, Martin NG, Hickie IB, Toga AW, Wright MJ, Thompson PM. Development of brain structural connectivity between ages 12 and 30: a 4-Tesla diffusion imaging study in 439 adolescents and adults. Neuroimage. 2013 Jan 1;64:671-84. doi: 10.1016/j.neuroimage.2012.09.004. Epub 2012 Sep 14. PMID: 22982357; PMCID: PMC3603574.

Dennis EL, Thompson PM. Mapping connectivity in the developing brain. Int J Dev Neurosci. 2013 Nov;31(7):525-42. doi: 10.1016/j.ijdevneu.2013.05.007. Epub 2013 May 27. PMID: 23722009; PMCID: PMC3800504.

Dennis EL, Thompson PM. Typical and atypical brain development: a review of neuroimaging studies. Dialogues Clin Neurosci. 2013 Sep;15(3):359-84. PMID: 24174907; PMCID: PMC3811107.

Dennis EL, Jahanshad N, Toga AW, McMahon KL, de Zubicaray GI, Hickie I, Wright MJ, Thompson PM. DEVELOPMENT OF THE “RICH CLUB” IN BRAIN CONNECTIVITY NETWORKS FROM 438 ADOLESCENTS & ADULTS AGED 12 TO 30. Proc IEEE Int Symp Biomed Imaging. 2013:624-627. doi: 10.1109/ISBI.2013.6556552. PMID: 24827471; PMCID: PMC4017916.

Daianu M, Dennis EL, Jahanshad N, Nir TM, Toga AW, Jack CR Jr, Weiner MW, Thompson PM; the Alzheimer’s Disease Neuroimaging Initiative. Alzheimer’s Disease Disrupts Rich Club Organization in Brain Connectivity Networks. Proc IEEE Int Symp Biomed Imaging. 2013:266-269. doi: 10.1109/ISBI.2013.6556463. PMID: 24953139; PMCID: PMC4063983.

Dennis EL, Thompson PM. Functional brain connectivity using fMRI in aging and Alzheimer’s disease. Neuropsychol Rev. 2014 Mar;24(1):49-62. doi: 10.1007/s11065-014-9249-6. Epub 2014 Feb 23. PMID: 24562737; PMCID: PMC4109887.

Dennis EL, Jahanshad N, McMahon KL, de Zubicaray GI, Martin NG, Hickie IB, Toga AW, Wright MJ, Thompson PM. Development of insula connectivity between ages 12 and 30 revealed by high angular resolution diffusion imaging. Hum Brain Mapp. 2014 Apr;35(4):1790-800. doi: 10.1002/hbm.22292. Epub 2013 Jul 8. PMID: 23836455; PMCID: PMC4017914.

Dennis EL, Jahanshad N, Braskie MN, Warstadt NM, Hibar DP, Kohannim O, Nir TM, McMahon KL, de Zubicaray GI, Montgomery GW, Martin NG, Toga AW, Wright MJ, Thompson PM. Obesity gene NEGR1 associated with white matter integrity in healthy young adults. Neuroimage. 2014 Nov 15;102 Pt 2(0 2):548-57. doi: 10.1016/j.neuroimage.2014.07.041. Epub 2014 Jul 27. PMID: 25072390; PMCID: PMC4269485.

Warstadt NM, Dennis EL, Jahanshad N, Kohannim O, Nir TM, McMahon KL, de Zubicaray GI, Montgomery GW, Henders AK, Martin NG, Whitfield JB, Jack CR Jr, Bernstein MA, Weiner MW, Toga AW, Wright MJ, Thompson PM; Alzheimer’s Disease Neuroimaging Initiative (ADNI). Serum cholesterol and variant in cholesterol-related gene CETP predict white matter microstructure. Neurobiol Aging. 2014 Nov;35(11):2504-2513. doi: 10.1016/j.neurobiolaging.2014.05.024. Epub 2014 Jun 2. PMID: 24997672; PMCID: PMC4198330.

Dennis EL, Jin Y, Villalon-Reina JE, Zhan L, Kernan CL, Babikian T, Mink RB, Babbitt CJ, Johnson JL, Giza CC, Thompson PM, Asarnow RF. White matter disruption in moderate/severe pediatric traumatic brain injury: advanced tract-based analyses. Neuroimage Clin. 2015 Feb 12;7:493-505. doi: 10.1016/j.nicl.2015.02.002. PMID: 25737958; PMCID: PMC4338205.

Han A, Stoilov P, Linares AJ, Zhou Y, Fu XD, Black DL. De novo prediction of PTBP1 binding and splicing targets reveals unexpected features of its RNA recognition and function. PLoS Comput Biol. 2014 Jan 30;10(1):e1003442. doi: 10.1371/journal.pcbi.1003442. PMID: 24499931; PMCID: PMC3907290.

Yeom KH, Mitchell S, Linares AJ, Zheng S, Lin CH, Wang XJ, Hoffmann A, Black DL. Polypyrimidine tract-binding protein blocks miRNA-124 biogenesis to enforce its neuronal-specific expression in the mouse. Proc Natl Acad Sci U S A. 2018 Nov 20;115(47):E11061-E11070. doi: 10.1073/pnas.1809609115. PMID: 30401736; PMCID: PMC6255174.

Fogel BL, Wexler E, Wahnich A, Friedrich T, Vijayendran C, Gao F, Parikshak N, Konopka G, Geschwind DH. RBFOX1 regulates both splicing and transcriptional networks in human neuronal development. Hum Mol Genet. 2012 Oct 1;21(19):4171-86. doi: 10.1093/hmg/dds240. Epub 2012 Jun 23. PMID: 22730494; PMCID: PMC3441119.

Sanders SJ, Murtha MT, Gupta AR, Murdoch JD, Raubeson MJ, Willsey AJ, Ercan-Sencicek AG, DiLullo NM, Parikshak NN, Stein JL, Walker MF, Ober GT, Teran NA, Song Y, El-Fishawy P, Murtha RC, Choi M, Overton JD, Bjornson RD, Carriero NJ, Meyer KA, Bilguvar K, Mane SM, Sestan N, Lifton RP, Günel M, Roeder K, Geschwind DH, Devlin B, State MW. De novo mutations revealed by whole-exome sequencing are strongly associated with autism. Nature. 2012 Apr 4;485(7397):237-41. doi: 10.1038/nature10945. PMID: 22495306; PMCID: PMC3667984.

Furlotte NA, Kang EY, Van Nas A, Farber CR, Lusis AJ, Eskin E. Increasing association mapping power and resolution in mouse genetic studies through the use of meta-analysis for structured populations. Genetics. 2012 Jul;191(3):959-67. doi: 10.1534/genetics.112.140277. Epub 2012 Apr 13. PMID: 22505625; PMCID: PMC3389987.

Furlotte NA, Eskin E, Eyheramendy S. Genome-wide association mapping with longitudinal data. Genet Epidemiol. 2012 Jul;36(5):463-71. doi: 10.1002/gepi.21640. Epub 2012 May 11. PMID: 22581622; PMCID: PMC3625633.

Kang EY, Han B, Furlotte N, Joo JW, Shih D, Davis RC, Lusis AJ, Eskin E. Meta-analysis identifies gene-by-environment interactions as demonstrated in a study of 4,965 mice. PLoS Genet. 2014 Jan;10(1):e1004022. doi: 10.1371/journal.pgen.1004022. Epub 2014 Jan 9. PMID: 24415945; PMCID: PMC3886926.

Furlotte NA, Eskin E. Efficient multiple-trait association and estimation of genetic correlation using the matrix-variate linear mixed model. Genetics. 2015 May;200(1):59-68. doi: 10.1534/genetics.114.171447. Epub 2015 Feb 27. PMID: 25724382; PMCID: PMC4423381.

Bennett BJ, Farber CR, Orozco L, Kang HM, Ghazalpour A, Siemers N, Neubauer M, Neuhaus I, Yordanova R, Guan B, Truong A, Yang WP, He A, Kayne P, Gargalovic P, Kirchgessner T, Pan C, Castellani LW, Kostem E, Furlotte N, Drake TA, Eskin E, Lusis AJ. A high-resolution association mapping panel for the dissection of complex traits in mice. Genome Res. 2010 Feb;20(2):281-90. doi: 10.1101/gr.099234.109. Epub 2010 Jan 6. PMID: 20054062; PMCID: PMC2813484.

Kirby A, Kang HM, Wade CM, Cotsapas C, Kostem E, Han B, Furlotte N, Kang EY, Rivas M, Bogue MA, Frazer KA, Johnson FM, Beilharz EJ, Cox DR, Eskin E, Daly MJ. Fine mapping in 94 inbred mouse strains using a high-density haplotype resource. Genetics. 2010 Jul;185(3):1081-95. doi: 10.1534/genetics.110.115014. Epub 2010 May 3. PMID: 20439770; PMCID: PMC2907194.

Farber CR, Bennett BJ, Orozco L, Zou W, Lira A, Kostem E, Kang HM, Furlotte N, Berberyan A, Ghazalpour A, Suwanwela J, Drake TA, Eskin E, Wang QT, Teitelbaum SL, Lusis AJ. Mouse genome-wide association and systems genetics identify Asxl2 as a regulator of bone mineral density and osteoclastogenesis. PLoS Genet. 2011 Apr;7(4):e1002038. doi: 10.1371/journal.pgen.1002038. Epub 2011 Apr 7. PMID: 21490954; PMCID: PMC3072371.

Kostem E, Lozano JA, Eskin E. Increasing power of genome-wide association studies by collecting additional single-nucleotide polymorphisms. Genetics. 2011 Jun;188(2):449-60. doi: 10.1534/genetics.111.128595. Epub 2011 Apr 5. PMID: 21467568; PMCID: PMC3122306.

Bennett BJ, Orozco L, Kostem E, Erbilgin A, Dallinga M, Neuhaus I, Guan B, Wang X, Eskin E, Lusis AJ. High-resolution association mapping of atherosclerosis loci in mice. Arterioscler Thromb Vasc Biol. 2012 Aug;32(8):1790-8. doi: 10.1161/ATVBAHA.112.253864. Epub 2012 Jun 21. PMID: 22723443; PMCID: PMC3519423.

Ghazalpour A, Rau CD, Farber CR, Bennett BJ, Orozco LD, van Nas A, Pan C, Allayee H, Beaven SW, Civelek M, Davis RC, Drake TA, Friedman RA, Furlotte N, Hui ST, Jentsch JD, Kostem E, Kang HM, Kang EY, Joo JW, Korshunov VA, Laughlin RE, Martin LJ, Ohmen JD, Parks BW, Pellegrini M, Reue K, Smith DJ, Tetradis S, Wang J, Wang Y, Weiss JN, Kirchgessner T, Gargalovic PS, Eskin E, Lusis AJ, LeBoeuf RC. Hybrid mouse diversity panel: a panel of inbred mouse strains suitable for analysis of complex genetic traits. Mamm Genome. 2012 Oct;23(9-10):680-92. doi: 10.1007/s00335-012-9411-5. Epub 2012 Aug 15. PMID: 22892838; PMCID: PMC3586763.

Parks BW, Nam E, Org E, Kostem E, Norheim F, Hui ST, Pan C, Civelek M, Rau CD, Bennett BJ, Mehrabian M, Ursell LK, He A, Castellani LW, Zinker B, Kirby M, Drake TA, Drevon CA, Knight R, Gargalovic P, Kirchgessner T, Eskin E, Lusis AJ. Genetic control of obesity and gut microbiota composition in response to high-fat, high-sucrose diet in mice. Cell Metab. 2013 Jan 8;17(1):141-52. doi: 10.1016/j.cmet.2012.12.007. PMID: 23312289; PMCID: PMC3545283.

Kostem E, Eskin E. Improving the accuracy and efficiency of partitioning heritability into the contributions of genomic regions. Am J Hum Genet. 2013 Apr 4;92(4):558-64. doi: 10.1016/j.ajhg.2013.03.010. PMID: 23561845; PMCID: PMC3617385.

Kostem E, Eskin E. Efficiently identifying significant associations in genome-wide association studies. J Comput Biol. 2013 Oct;20(10):817-30. doi: 10.1089/cmb.2013.0087. Epub 2013 Sep 14. PMID: 24033261; PMCID: PMC3791046.

Leikauf GD, Concel VJ, Bein K, Liu P, Berndt A, Martin TM, Ganguly K, Jang AS, Brant KA, Dopico RA Jr, Upadhyay S, Cario C, Di YP, Vuga LJ, Kostem E, Eskin E, You M, Kaminski N, Prows DR, Knoell DL, Fabisiak JP. Functional genomic assessment of phosgene-induced acute lung injury in mice. Am J Respir Cell Mol Biol. 2013 Sep;49(3):368-83. doi: 10.1165/rcmb.2012-0337OC. PMID: 23590305; PMCID: PMC3824050.

Ho VM, Lee JA, Martin KC. The cell biology of synaptic plasticity. Science. 2011 Nov 4;334(6056):623-8. doi: 10.1126/science.1209236. PMID: 22053042; PMCID: PMC3286636.

Ho VM, Dallalzadeh LO, Karathanasis N, Keles MF, Vangala S, Grogan T, Poirazi P, Martin KC. GluA2 mRNA distribution and regulation by miR-124 in hippocampal neurons. Mol Cell Neurosci. 2014 Jul;61:1-12. doi: 10.1016/j.mcn.2014.04.006. Epub 2014 Apr 28. PMID: 24784359; PMCID: PMC4134974.

Cummings DM, André VM, Uzgil BO, Gee SM, Fisher YE, Cepeda C, Levine MS. Alterations in cortical excitation and inhibition in genetic mouse models of Huntington’s disease. Version 2. J Neurosci. 2009 Aug 19;29(33):10371-86. doi: 10.1523/JNEUROSCI.1592-09.2009. PMID: 19692612; PMCID: PMC2754238.

Ch’ng TH, Uzgil B, Lin P, Avliyakulov NK, O’Dell TJ, Martin KC. Activity-dependent transport of the transcriptional coactivator CRTC1 from synapse to nucleus. Cell. 2012 Jul 6;150(1):207-21. doi: 10.1016/j.cell.2012.05.027. PMID: 22770221; PMCID: PMC4037152.

Cummings DM, André VM, Uzgil BO, Gee SM, Fisher YE, Cepeda C, Levine MS. Alterations in cortical excitation and inhibition in genetic mouse models of Huntington’s disease. Version 2. J Neurosci. 2009 Aug 19;29(33):10371-86. doi: 10.1523/JNEUROSCI.1592-09.2009. PMID: 19692612; PMCID: PMC2754238.

Scott-Van Zeeland AA, Abrahams BS, Alvarez-Retuerto AI, Sonnenblick LI, Rudie JD, Ghahremani D, Mumford JA, Poldrack RA, Dapretto M, Geschwind DH, Bookheimer SY. Altered functional connectivity in frontal lobe circuits is associated with variation in the autism risk gene CNTNAP2. Sci Transl Med. 2010 Nov 3;2(56):56ra80. doi: 10.1126/scitranslmed.3001344. PMID: 21048216; PMCID: PMC3065863.

Dennis EL, Jahanshad N, Rudie JD, Brown JA, Johnson K, McMahon KL, de Zubicaray GI, Montgomery G, Martin NG, Wright MJ, Bookheimer SY, Dapretto M, Toga AW, Thompson PM. Altered structural brain connectivity in healthy carriers of the autism risk gene, CNTNAP2. Version 2. Brain Connect. 2011;1(6):447-59. doi: 10.1089/brain.2011.0064. Erratum in: Brain Connect. 2012;2(6):356. PMID: 22500773; PMCID: PMC3420970.

Colich NL, Wang AT, Rudie JD, Hernandez LM, Bookheimer SY, Dapretto M. Atypical Neural Processing of Ironic and Sincere Remarks in Children and Adolescents with Autism Spectrum Disorders. Metaphor Symb. 2012;27(1):70-92. doi: 10.1080/10926488.2012.638856. PMID: 24497750; PMCID: PMC3909704.

Rudie JD, Brown JA, Beck-Pancer D, Hernandez LM, Dennis EL, Thompson PM, Bookheimer SY, Dapretto M. Altered functional and structural brain network organization in autism. Neuroimage Clin. 2012 Nov 16;2:79-94. doi: 10.1016/j.nicl.2012.11.006. PMID: 24179761; PMCID: PMC3777708.

Pfeifer JH, Merchant JS, Colich NL, Hernandez LM, Rudie JD, Dapretto M. Neural and behavioral responses during self-evaluative processes differ in youth with and without autism. J Autism Dev Disord. 2013 Feb;43(2):272-85. doi: 10.1007/s10803-012-1563-3. PMID: 22760337; PMCID: PMC3507334.

Rudie JD, Dapretto M. Convergent evidence of brain overconnectivity in children with autism? Cell Rep. 2013 Nov 14;5(3):565-6. doi: 10.1016/j.celrep.2013.10.043. PMID: 24238089; PMCID: PMC6396279.

Green SA, Rudie JD, Colich NL, Wood JJ, Shirinyan D, Hernandez L, Tottenham N, Dapretto M, Bookheimer SY. Overreactive brain responses to sensory stimuli in youth with autism spectrum disorders. J Am Acad Child Adolesc Psychiatry. 2013 Nov;52(11):1158-72. doi: 10.1016/j.jaac.2013.08.004. Epub 2013 Aug 24. PMID: 24157390; PMCID: PMC3820504.

Sherman LE, Rudie JD, Pfeifer JH, Masten CL, McNealy K, Dapretto M. Development of the default mode and central executive networks across early adolescence: a longitudinal study. Version 2. Dev Cogn Neurosci. 2014 Oct;10:148-59. doi: 10.1016/j.dcn.2014.08.002. Epub 2014 Aug 20. PMID: 25282602; PMCID: PMC4854607.

Hernandez LM, Rudie JD, Green SA, Bookheimer S, Dapretto M. Neural signatures of autism spectrum disorders: insights into brain network dynamics. Neuropsychopharmacology. 2015 Jan;40(1):171-89. doi: 10.1038/npp.2014.172. Epub 2014 Jul 11. PMID: 25011468; PMCID: PMC4262896.

Wilburn B, Rudnicki DD, Zhao J, Weitz TM, Cheng Y, Gu X, Greiner E, Park CS, Wang N, Sopher BL, La Spada AR, Osmand A, Margolis RL, Sun YE, Yang XW. An antisense CAG repeat transcript at JPH3 locus mediates expanded polyglutamine protein toxicity in Huntington’s disease-like 2 mice. Neuron. 2011 May 12;70(3):427-40. doi: 10.1016/j.neuron.2011.03.021. PMID: 21555070; PMCID: PMC3107122.

Cui Y, Ostlund SB, James AS, Park CS, Ge W, Roberts KW, Mittal N, Murphy NP, Cepeda C, Kieffer BL, Levine MS, Jentsch JD, Walwyn WM, Sun YE, Evans CJ, Maidment NT, Yang XW. Targeted expression of μ-opioid receptors in a subset of striatal direct-pathway neurons restores opiate reward. Nat Neurosci. 2014 Feb;17(2):254-61. doi: 10.1038/nn.3622. Epub 2014 Jan 12. PMID: 24413699; PMCID: PMC4008330.

Gu X, Cantle JP, Greiner ER, Lee CY, Barth AM, Gao F, Park CS, Zhang Z, Sandoval-Miller S, Zhang RL, Diamond M, Mody I, Coppola G, Yang XW. N17 Modifies mutant Huntingtin nuclear pathogenesis and severity of disease in HD BAC transgenic mice. Neuron. 2015 Feb 18;85(4):726-41. doi: 10.1016/j.neuron.2015.01.008. Epub 2015 Feb 5. PMID: 25661181; PMCID: PMC4386927.

Rosen EY, Wexler EM, Versano R, Coppola G, Gao F, Winden KD, Oldham MC, Martens LH, Zhou P, Farese RV Jr, Geschwind DH. Functional genomic analyses identify pathways dysregulated by progranulin deficiency, implicating Wnt signaling. Neuron. 2011 Sep 22;71(6):1030-42. doi: 10.1016/j.neuron.2011.07.021. Epub 2011 Sep 21. PMID: 21943601; PMCID: PMC3633414.

Wexler EM, Rosen E, Lu D, Osborn GE, Martin E, Raybould H, Geschwind DH. Genome-wide analysis of a Wnt1-regulated transcriptional network implicates neurodegenerative pathways. Sci Signal. 2011 Oct 4;4(193):ra65. doi: 10.1126/scisignal.2002282. PMID: 21971039; PMCID: PMC3856943.

 

Publications by Postdoctoral Trainees

Appointed 2019 - present

Border R, Athanasiadis G, Buil A, Schork AJ, Cai N, Young AI, Werge T, Flint J, Kendler KS, Sankararaman S, Dahl AW, Zaitlen NA. Cross-trait assortative mating is widespread and inflates genetic correlation estimates. Science. 2022 Nov 18;378(6621):754-761. doi: 10.1126/science.abo2059. Epub 2022 Nov 17. PMID: 36395242.

Hoftman GD, Bazmi HH, Ciesielski AJ, Dinka LA, Chen K, Lewis DA. Postnatal Development of Glutamate and GABA Transcript Expression in Monkey Visual, Parietal, and Prefrontal Cortices. Cerebral cortex (New York, N.Y. : 1991). 2021 March 5;31(4):2026-2037. PubMed PMID: 33279960; PubMed Central PMCID: PMC8248841; DOI: 10.1093/cercor/bhaa342.

Geschwind D, Wamsley B. Functional Genomics links Genetic Origins to Pathophysiology in Neurodegenerative and Neuropsychiatric Disease. Curr Opin Genet Dev. Forthcoming 2020.

 

Appointed 2014 - 2018

Jung SY, Mancuso N, Yu H, Papp J, Sobel E, Zhang ZF. Genome-Wide Meta-analysis of Gene-Environmental Interaction for Insulin Resistance Phenotypes and Breast Cancer Risk in Postmenopausal Women. Cancer Prev Res (Phila). 2019 Jan;12(1):31-42. Doi: 10.1158/1940-6207.CAPR-18-0180. Epub 2018 Oct 16. PMID: 30327367.

Mancuso N, Gayther S, Gusev A, Zheng W, Penney KL; PRACTICAL consortium, Kote-Jarai Z, Eeles R, Freedman M, Haiman C, Pasaniuc B. Author Correction: Large-scale transcriptome-wide association study identifies new prostate cancer risk regions. Nat Commun. 2019 Jan 8;10(1):171. Doi: 10.1038/s41467-018-08108-7. Erratum for: Nat Commun. 2018 Oct 4;9(1):4079. PMID: 30622272; PMCID: PMC6325152.

Mancuso N, Freund MK, Johnson R, Shi H, Kichaev G, Gusev A, Pasaniuc B. Probabilistic fine-mapping of transcriptome-wide association studies. Nat Genet. 2019 Apr;51(4):675-682. Doi: 10.1038/s41588-019-0367-1. Epub 2019 Mar 29. PMID: 30926970; PMCID: PMC6619422.

Wainberg M, Sinnott-Armstrong N, Mancuso N, Barbeira AN, Knowles DA, Golan D, Ermel R, Ruusalepp A, Quertermous T, Hao K, Björkegren JLM, Im HK, Pasaniuc B, Rivas MA, Kundaje A. Opportunities and challenges for transcriptome-wide association studies. Nat Genet. 2019 Apr;51(4):592-599. Doi: 10.1038/s41588-019-0385-z. Epub 2019 Mar 29. PMID: 30926968; PMCID: PMC6777347.

Major M, Freund MK, Burch KS, Mancuso N, Ng M, Furniss D, Pasaniuc B, Ophoff RA. Integrative analysis of Dupuytren’s disease identifies novel risk locus and reveals a shared genetic etiology with BMI. Genet Epidemiol. 2019 Sep;43(6):629-645. Doi: 10.1002/gepi.22209. Epub 2019 May 13. PMID: 31087417; PMCID: PMC6699495.

Hou K, Burch KS, Majumdar A, Shi H, Mancuso N, Wu Y, Sankararaman S, Pasaniuc B. Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. Nat Genet. 2019 Aug;51(8):1244-1251. Doi: 10.1038/s41588-019-0465-0. Epub 2019 Jul 29. PMID: 31358995; PMCID: PMC6686906.

Walker RL, Ramaswami G, Hartl C, Mancuso N, Gandal MJ, de la Torre-Ubieta L, Pasaniuc B, Stein JL, Geschwind DH. Genetic Control of Expression and Splicing in Developing Human Brain Informs Disease Mechanisms. Cell. 2019 Oct 17;179(3):750-771.e22. doi: 10.1016/j.cell.2019.09.021. PMID: 31626773. PMCID in progress

Chen P, Hong W. Neural Circuit Mechanisms of Social Behavior. Neuron. 2018 Apr 4;98(1):16-30. Doi: 10.1016/j.neuron.2018.02.026. PMID: 29621486; PMCID: PMC6028944.

Chen PB, Hu RK, Wu YE, Pan L, Huang S, Micevych PE, Hong W. Sexually Dimorphic Control of Parenting Behavior by the Medial Amygdala. Cell. 2019 Feb 21;176(5):1206-1221.e18. doi: 10.1016/j.cell.2019.01.024. Epub 2019 Feb 14. PMID: 30773317; PMCID: PMC6555485.

Dobbyn A, Huckins LM, Boocock J, Sloofman LG, Glicksberg BS, Giambartolomei C, Hoffman GE, Perumal TM, Girdhar K, Jiang Y, Raj T, Ruderfer DM, Kramer RS, Pinto D; CommonMind Consortium, Akbarian S, Roussos P, Domenici E, Devlin B, Sklar P, Stahl EA, Sieberts SK. Landscape of Conditional eQTL in Dorsolateral Prefrontal Cortex and Co-localization with Schizophrenia GWAS. Am J Hum Genet. 2018 Jun 7;102(6):1169-1184. Doi: 10.1016/j.ajhg.2018.04.011. Epub 2018 May 24. PMID: 29805045; PMCID: PMC5993513.

Hauberg ME, Fullard JF, Zhu L, Cohain AT, Giambartolomei C, Misir R, Reach S, Johnson JS, Wang M, Mattheisen M, Børglum AD, Zhang B, Sieberts SK, Peters MA, Domenici E, Schadt EE, Devlin B, Sklar P, Roeder K, Roussos P; CommonMind Consortium. Differential activity of transcribed enhancers in the prefrontal cortex of 537 cases with schizophrenia and controls. Mol Psychiatry. 2019 Nov;24(11):1685-1695. Doi: 10.1038/s41380-018-0059-8. Epub 2018 May 8. PMID: 29740122; PMCID: PMC6222027.

Giambartolomei C, Zhenli Liu J, Zhang W, Hauberg M, Shi H, Boocock J, Pickrell J, Jaffe AE; CommonMind Consortium, Pasaniuc B, Roussos P. A Bayesian framework for multiple trait colocalization from summary association statistics. Bioinformatics. 2018 Aug 1;34(15):2538-2545. Doi: 10.1093/bioinformatics/bty147. PMID: 29579179; PMCID: PMC6061859.

Franceschini N, Giambartolomei C, de Vries PS, Finan C, Bis JC, Huntley RP, Lovering RC, Tajuddin SM, Winkler TW, Graff M, Kavousi M, Dale C, Smith AV, Hofer E, van Leeuwen EM, Nolte IM, Lu L, Scholz M, Sargurupremraj M, Pitkänen N, Franzén O, Joshi PK, Noordam R, Marioni RE, Hwang SJ, Musani SK, Schminke U, Palmas W, Isaacs A, Correa A, Zonderman AB, Hofman A, Teumer A, Cox AJ, Uitterlinden AG, Wong A, Smit AJ, Newman AB, Britton A, Ruusalepp A, Sennblad B, Hedblad B, Pasaniuc B, Penninx BW, Langefeld CD, Wassel CL, Tzourio C, Fava C, Baldassarre D, O’Leary DH, Teupser D, Kuh D, Tremoli E, Mannarino E, Grossi E, Boerwinkle E, Schadt EE, Ingelsson E, Veglia F, Rivadeneira F, Beutner F, Chauhan G, Heiss G, Snieder H, Campbell H, Völzke H, Markus HS, Deary IJ, Jukema JW, de Graaf J, Price J, Pott J, Hopewell JC, Liang J, Thiery J, Engmann J, Gertow K, Rice K, Taylor KD, Dhana K, Kiemeney LALM, Lind L, Raffield LM, Launer LJ, Holdt LM, Dörr M, Dichgans M, Traylor M, Sitzer M, Kumari M, Kivimaki M, Nalls MA, Melander O, Raitakari O, Franco OH, Rueda-Ochoa OL, Roussos P, Whincup PH, Amouyel P, Giral P, Anugu P, Wong Q, Malik R, Rauramaa R, Burkhardt R, Hardy R, Schmidt R, de Mutsert R, Morris RW, Strawbridge RJ, Wannamethee SG, Hägg S, Shah S, McLachlan S, Trompet S, Seshadri S, Kurl S, Heckbert SR, Ring S, Harris TB, Lehtimäki T, Galesloot TE, Shah T, de Faire U, Plagnol V, Rosamond WD, Post W, Zhu X, Zhang X, Guo X, Saba Y, Dehghan A, Seldenrijk A, Morrison AC, Hamsten A, Psaty BM, van Duijn CM, Lawlor DA, Mook-Kanamori DO, Bowden DW, Schmidt H, Wilson JF, Wilson JG, Rotter JI, Wardlaw JM, Deanfield J, Halcox J, Lyytikäinen LP, Loeffler M, Evans MK, Debette S, Humphries SE, Völker U, Gudnason V, Hingorani AD, Björkegren JLM, Casas JP, O’Donnell CJ. GWAS and colocalization analyses implicate carotid intima-media thickness and carotid plaque loci in cardiovascular outcomes. Nature communications. 2018 December 3;9(1):5141. PubMed PMID: 30510157; PubMed Central PMCID: PMC6277418.

Stahl EA, Breen G, Forstner AJ, McQuillin A, Ripke S, Trubetskoy V, Mattheisen M, Wang Y, Coleman JRI, Gaspar HA, de Leeuw CA, Steinberg S, Pavlides JMW, Trzaskowski M, Byrne EM, Pers TH, Holmans PA, Richards AL, Abbott L, Agerbo E, Akil H, Albani D, Alliey-Rodriguez N, Als TD, Anjorin A, Antilla V, Awasthi S, Badner JA, Bækvad-Hansen M, Barchas JD, Bass N, Bauer M, Belliveau R, Bergen SE, Pedersen CB, Bøen E, Boks MP, Boocock J, Budde M, Bunney W, Burmeister M, Bybjerg-Grauholm J, Byerley W, Casas M, Cerrato F, Cervantes P, Chambert K, Charney AW, Chen D, Churchhouse C, Clarke TK, Coryell W, Craig DW, Cruceanu C, Curtis D, Czerski PM, Dale AM, de Jong S, Degenhardt F, Del-Favero J, DePaulo JR, Djurovic S, Dobbyn AL, Dumont A, Elvsåshagen T, Escott-Price V, Fan CC, Fischer SB, Flickinger M, Foroud TM, Forty L, Frank J, Fraser C, Freimer NB, Frisén L, Gade K, Gage D, Garnham J, Giambartolomei C, Pedersen MG, Goldstein J, Gordon SD, Gordon-Smith K, Green EK, Green MJ, Greenwood TA, Grove J, Guan W, Guzman-Parra J, Hamshere ML, Hautzinger M, Heilbronner U, Herms S, Hipolito M, Hoffmann P, Holland D, Huckins L, Jamain S, Johnson JS, Juréus A, Kandaswamy R, Karlsson R, Kennedy JL, Kittel-Schneider S, Knowles JA, Kogevinas M, Koller AC, Kupka R, Lavebratt C, Lawrence J, Lawson WB, Leber M, Lee PH, Levy SE, Li JZ, Liu C, Lucae S, Maaser A, MacIntyre DJ, Mahon PB, Maier W, Martinsson L, McCarroll S, McGuffin P, McInnis MG, McKay JD, Medeiros H, Medland SE, Meng F, Milani L, Montgomery GW, Morris DW, Mühleisen TW, Mullins N, Nguyen H, Nievergelt CM, Adolfsson AN, Nwulia EA, O’Donovan C, Loohuis LMO, Ori APS, Oruc L, Ösby U, Perlis RH, Perry A, Pfennig A, Potash JB, Purcell SM, Regeer EJ, Reif A, Reinbold CS, Rice JP, Rivas F, Rivera M, Roussos P, Ruderfer DM, Ryu E, Sánchez-Mora C, Schatzberg AF, Scheftner WA, Schork NJ, Shannon Weickert C, Shehktman T, Shilling PD, Sigurdsson E, Slaney C, Smeland OB, Sobell JL, Søholm Hansen C, Spijker AT, St Clair D, Steffens M, Strauss JS, Streit F, Strohmaier J, Szelinger S, Thompson RC, Thorgeirsson TE, Treutlein J, Vedder H, Wang W, Watson SJ, Weickert TW, Witt SH, Xi S, Xu W, Young AH, Zandi P, Zhang P, Zöllner S; eQTLGen Consortium; BIOS Consortium, Adolfsson R, Agartz I, Alda M, Backlund L, Baune BT, Bellivier F, Berrettini WH, Biernacka JM, Blackwood DHR, Boehnke M, Børglum AD, Corvin A, Craddock N, Daly MJ, Dannlowski U, Esko T, Etain B, Frye M, Fullerton JM, Gershon ES, Gill M, Goes F, Grigoroiu-Serbanescu M, Hauser J, Hougaard DM, Hultman CM, Jones I, Jones LA, Kahn RS, Kirov G, Landén M, Leboyer M, Lewis CM, Li QS, Lissowska J, Martin NG, Mayoral F, McElroy SL, McIntosh AM, McMahon FJ, Melle I, Metspalu A, Mitchell PB, Morken G, Mors O, Mortensen PB, Müller-Myhsok B, Myers RM, Neale BM, Nimgaonkar V, Nordentoft M, Nöthen MM, O’Donovan MC, Oedegaard KJ, Owen MJ, Paciga SA, Pato C, Pato MT, Posthuma D, Ramos-Quiroga JA, Ribasés M, Rietschel M, Rouleau GA, Schalling M, Schofield PR, Schulze TG, Serretti A, Smoller JW, Stefansson H, Stefansson K, Stordal E, Sullivan PF, Turecki G, Vaaler AE, Vieta E, Vincent JB, Werge T, Nurnberger JI, Wray NR, Di Florio A, Edenberg HJ, Cichon S, Ophoff RA, Scott LJ, Andreassen OA, Kelsoe J, Sklar P; Bipolar Disorder Working Group of the Psychiatric Genomics Consortium. Genome-wide association study identifies 30 loci associated with bipolar disorder. Nat Genet. 2019 May;51(5):793-803. Doi: 10.1038/s41588-019-0397-8. Epub 2019 May 1. PMID: 31043756; PMCID: PMC6956732.

Fejzo MS, Sazonova OV, Sathirapongsasuti JF, Hallgrímsdóttir IB, Vacic V, MacGibbon KW, Schoenberg FP, Mancuso N, Slamon DJ, Mullin PM; 23andMe Research Team. Placenta and appetite genes GDF15 and IGFBP7 are associated with hyperemesis gravidarum. Nat Commun. 2018 Mar 21;9(1):1178. Doi: 10.1038/s41467-018-03258-0. PMID: 29563502; PMCID: PMC5862842.

Brown R, Kichaev G, Mancuso N, Boocock J, Pasaniuc B. Enhanced methods to detect haplotypic effects on gene expression. Bioinformatics. 2017 Aug 1;33(15):2307-2313. Doi: 10.1093/bioinformatics/btx142. PMID: 28369161; PMCID: PMC5860109.

Hill BL, Brown R, Gabel E, Rakocz N, Lee C, Cannesson M, Baldi P, Olde Loohuis L, Johnson R, Jew B, Maoz U, Mahajan A, Sankararaman S, Hofer I, Halperin E. An automated machine learning-based model predicts postoperative mortality using readily-extractable preoperative electronic health record data. Br J Anaesth. 2019 Dec;123(6):877-886. Doi: 10.1016/j.bja.2019.07.030. PMID: 31627890; PMCID: PMC6883494.

Roussotte FF, Hua X, Narr KL, Small GW, Thompson PM; Alzheimer’s Disease Neuroimaging Initiative. The C677T variant in MTHFR modulates associations between brain integrity, mood, and cognitive functioning in old age. Biol Psychiatry Cogn Neurosci Neuroimaging. 2017 Apr;2(3):280-288. doi: 10.1016/j.bpsc.2016.09.005. PMID: 28435933; PMCID: PMC5395287.

Roussotte FF, Siddarth P, Merrill DA, Narr KL, Ercoli LM, Martinez J, Emerson ND, Barrio JR, Small GW. In Vivo Brain Plaque and Tangle Burden Mediates the Association Between Diastolic Blood Pressure and Cognitive Functioning in Nondemented Adults. Am J Geriatr Psychiatry. 2018 Jan;26(1):13-22. doi: 10.1016/j.jagp.2017.09.001. Epub 2017 Sep 15. PMID: 29111133; PMCID: PMC5768426.

Hibar DP, Stein JL, Renteria ME, Arias-Vasquez A, Desrivières S, Jahanshad N, Toro R, Wittfeld K, Abramovic L, Andersson M, Aribisala BS, Armstrong NJ, Bernard M, Bohlken MM, Boks MP, Bralten J, Brown AA, Chakravarty MM, Chen Q, Ching CR, Cuellar-Partida G, den Braber A, Giddaluru S, Goldman AL, Grimm O, Guadalupe T, Hass J, Woldehawariat G, Holmes AJ, Hoogman M, Janowitz D, Jia T, Kim S, Klein M, Kraemer B, Lee PH, Olde Loohuis LM, Luciano M, Macare C, Mather KA, Mattheisen M, Milaneschi Y, Nho K, Papmeyer M, Ramasamy A, Risacher SL, Roiz-Santiañez R, Rose EJ, Salami A, Sämann PG, Schmaal L, Schork AJ, Shin J, Strike LT, Teumer A, van Donkelaar MM, van Eijk KR, Walters RK, Westlye LT, Whelan CD, Winkler AM, Zwiers MP, Alhusaini S, Athanasiu L, Ehrlich S, Hakobjan MM, Hartberg CB, Haukvik UK, Heister AJ, Hoehn D, Kasperaviciute D, Liewald DC, Lopez LM, Makkinje RR, Matarin M, Naber MA, McKay DR, Needham M, Nugent AC, Pütz B, Royle NA, Shen L, Sprooten E, Trabzuni D, van der Marel SS, van Hulzen KJ, Walton E, Wolf C, Almasy L, Ames D, Arepalli S, Assareh AA, Bastin ME, Brodaty H, Bulayeva KB, Carless MA, Cichon S, Corvin A, Curran JE, Czisch M, de Zubicaray GI, Dillman A, Duggirala R, Dyer TD, Erk S, Fedko IO, Ferrucci L, Foroud TM, Fox PT, Fukunaga M, Gibbs JR, Göring HH, Green RC, Guelfi S, Hansell NK, Hartman CA, Hegenscheid K, Heinz A, Hernandez DG, Heslenfeld DJ, Hoekstra PJ, Holsboer F, Homuth G, Hottenga JJ, Ikeda M, Jack CR Jr, Jenkinson M, Johnson R, Kanai R, Keil M, Kent JW Jr, Kochunov P, Kwok JB, Lawrie SM, Liu X, Longo DL, McMahon KL, Meisenzahl E, Melle I, Mohnke S, Montgomery GW, Mostert JC, Mühleisen TW, Nalls MA, Nichols TE, Nilsson LG, Nöthen MM, Ohi K, Olvera RL, Perez-Iglesias R, Pike GB, Potkin SG, Reinvang I, Reppermund S, Rietschel M, Romanczuk-Seiferth N, Rosen GD, Rujescu D, Schnell K, Schofield PR, Smith C, Steen VM, Sussmann JE, Thalamuthu A, Toga AW, Traynor BJ, Troncoso J, Turner JA, Valdés Hernández MC, van ‘t Ent D, van der Brug M, van der Wee NJ, van Tol MJ, Veltman DJ, Wassink TH, Westman E, Zielke RH, Zonderman AB, Ashbrook DG, Hager R, Lu L, McMahon FJ, Morris DW, Williams RW, Brunner HG, Buckner RL, Buitelaar JK, Cahn W, Calhoun VD, Cavalleri GL, Crespo-Facorro B, Dale AM, Davies GE, Delanty N, Depondt C, Djurovic S, Drevets WC, Espeseth T, Gollub RL, Ho BC, Hoffmann W, Hosten N, Kahn RS, Le Hellard S, Meyer-Lindenberg A, Müller-Myhsok B, Nauck M, Nyberg L, Pandolfo M, Penninx BW, Roffman JL, Sisodiya SM, Smoller JW, van Bokhoven H, van Haren NE, Völzke H, Walter H, Weiner MW, Wen W, White T, Agartz I, Andreassen OA, Blangero J, Boomsma DI, Brouwer RM, Cannon DM, Cookson MR, de Geus EJ, Deary IJ, Donohoe G, Fernández G, Fisher SE, Francks C, Glahn DC, Grabe HJ, Gruber O, Hardy J, Hashimoto R, Hulshoff Pol HE, Jönsson EG, Kloszewska I, Lovestone S, Mattay VS, Mecocci P, McDonald C, McIntosh AM, Ophoff RA, Paus T, Pausova Z, Ryten M, Sachdev PS, Saykin AJ, Simmons A, Singleton A, Soininen H, Wardlaw JM, Weale ME, Weinberger DR, Adams HH, Launer LJ, Seiler S, Schmidt R, Chauhan G, Satizabal CL, Becker JT, Yanek L, van der Lee SJ, Ebling M, Fischl B, Longstreth WT Jr, Greve D, Schmidt H, Nyquist P, Vinke LN, van Duijn CM, Xue L, Mazoyer B, Bis JC, Gudnason V, Seshadri S, Ikram MA; Alzheimer’s Disease Neuroimaging Initiative; CHARGE Consortium; EPIGEN; IMAGEN; SYS, Martin NG, Wright MJ, Schumann G, Franke B, Thompson PM, Medland SE. Common genetic variants influence human subcortical brain structures. Nature. 2015 Apr 9;520(7546):224-9. doi: 10.1038/nature14101. Epub 2015 Jan 21. PMID: 25607358; PMCID: PMC4393366.

Loohuis LMO, Vorstman JAS, Ori AP, Staats KA, Wang T, Richards AL, Leonenko G, Walters JT, DeYoung J; GROUP consortium, Cantor RM, Ophoff RA. Genome-wide burden of deleterious coding variants increased in schizophrenia. Nat Commun. 2015 Jul 9;6:7501. doi: 10.1038/ncomms8501. PMID: 26158538; PMCID: PMC4499856.

Adams HH, Hibar DP, Chouraki V, Stein JL, Nyquist PA, Rentería ME, Trompet S, Arias-Vasquez A, Seshadri S, Desrivières S, Beecham AH, Jahanshad N, Wittfeld K, Van der Lee SJ, Abramovic L, Alhusaini S, Amin N, Andersson M, Arfanakis K, Aribisala BS, Armstrong NJ, Athanasiu L, Axelsson T, Beiser A, Bernard M, Bis JC, Blanken LM, Blanton SH, Bohlken MM, Boks MP, Bralten J, Brickman AM, Carmichael O, Chakravarty MM, Chauhan G, Chen Q, Ching CR, Cuellar-Partida G, Braber AD, Doan NT, Ehrlich S, Filippi I, Ge T, Giddaluru S, Goldman AL, Gottesman RF, Greven CU, Grimm O, Griswold ME, Guadalupe T, Hass J, Haukvik UK, Hilal S, Hofer E, Hoehn D, Holmes AJ, Hoogman M, Janowitz D, Jia T, Kasperaviciute D, Kim S, Klein M, Kraemer B, Lee PH, Liao J, Liewald DC, Lopez LM, Luciano M, Macare C, Marquand A, Matarin M, Mather KA, Mattheisen M, Mazoyer B, McKay DR, McWhirter R, Milaneschi Y, Mirza-Schreiber N, Muetzel RL, Maniega SM, Nho K, Nugent AC, Loohuis LM, Oosterlaan J, Papmeyer M, Pappa I, Pirpamer L, Pudas S, Pütz B, Rajan KB, Ramasamy A, Richards JS, Risacher SL, Roiz-Santiañez R, Rommelse N, Rose EJ, Royle NA, Rundek T, Sämann PG, Satizabal CL, Schmaal L, Schork AJ, Shen L, Shin J, Shumskaya E, Smith AV, Sprooten E, Strike LT, Teumer A, Thomson R, Tordesillas-Gutierrez D, Toro R, Trabzuni D, Vaidya D, Van der Grond J, Van der Meer D, Van Donkelaar MM, Van Eijk KR, Van Erp TG, Van Rooij D, Walton E, Westlye LT, Whelan CD, Windham BG, Winkler AM, Woldehawariat G, Wolf C, Wolfers T, Xu B, Yanek LR, Yang J, Zijdenbos A, Zwiers MP, Agartz I, Aggarwal NT, Almasy L, Ames D, Amouyel P, Andreassen OA, Arepalli S, Assareh AA, Barral S, Bastin ME, Becker DM, Becker JT, Bennett DA, Blangero J, van Bokhoven H, Boomsma DI, Brodaty H, Brouwer RM, Brunner HG, Buckner RL, Buitelaar JK, Bulayeva KB, Cahn W, Calhoun VD, Cannon DM, Cavalleri GL, Chen C, Cheng CY, Cichon S, Cookson MR, Corvin A, Crespo-Facorro B, Curran JE, Czisch M, Dale AM, Davies GE, De Geus EJ, De Jager PL, de Zubicaray GI, Delanty N, Depondt C, DeStefano AL, Dillman A, Djurovic S, Donohoe G, Drevets WC, Duggirala R, Dyer TD, Erk S, Espeseth T, Evans DA, Fedko IO, Fernández G, Ferrucci L, Fisher SE, Fleischman DA, Ford I, Foroud TM, Fox PT, Francks C, Fukunaga M, Gibbs JR, Glahn DC, Gollub RL, Göring HH, Grabe HJ, Green RC, Gruber O, Gudnason V, Guelfi S, Hansell NK, Hardy J, Hartman CA, Hashimoto R, Hegenscheid K, Heinz A, Le Hellard S, Hernandez DG, Heslenfeld DJ, Ho BC, Hoekstra PJ, Hoffmann W, Hofman A, Holsboer F, Homuth G, Hosten N, Hottenga JJ, Hulshoff Pol HE, Ikeda M, Ikram MK, Jack CR Jr, Jenkinson M, Johnson R, Jönsson EG, Jukema JW, Kahn RS, Kanai R, Kloszewska I, Knopman DS, Kochunov P, Kwok JB, Lawrie SM, Lemaître H, Liu X, Longo DL, Longstreth WT Jr, Lopez OL, Lovestone S, Martinez O, Martinot JL, Mattay VS, McDonald C, McIntosh AM, McMahon KL, McMahon FJ, Mecocci P, Melle I, Meyer-Lindenberg A, Mohnke S, Montgomery GW, Morris DW, Mosley TH, Mühleisen TW, Müller-Myhsok B, Nalls MA, Nauck M, Nichols TE, Niessen WJ, Nöthen MM, Nyberg L, Ohi K, Olvera RL, Ophoff RA, Pandolfo M, Paus T, Pausova Z, Penninx BW, Pike GB, Potkin SG, Psaty BM, Reppermund S, Rietschel M, Roffman JL, Romanczuk-Seiferth N, Rotter JI, Ryten M, Sacco RL, Sachdev PS, Saykin AJ, Schmidt R, Schofield PR, Sigurdsson S, Simmons A, Singleton A, Sisodiya SM, Smith C, Smoller JW, Soininen H, Srikanth V, Steen VM, Stott DJ, Sussmann JE, Thalamuthu A, Tiemeier H, Toga AW, Traynor BJ, Troncoso J, Turner JA, Tzourio C, Uitterlinden AG, Hernández MC, Van der Brug M, Van der Lugt A, Van der Wee NJ, Van Duijn CM, Van Haren NE, Van T Ent D, Van Tol MJ, Vardarajan BN, Veltman DJ, Vernooij MW, Völzke H, Walter H, Wardlaw JM, Wassink TH, Weale ME, Weinberger DR, Weiner MW, Wen W, Westman E, White T, Wong TY, Wright CB, Zielke HR, Zonderman AB, Deary IJ, DeCarli C, Schmidt H, Martin NG, De Craen AJ, Wright MJ, Launer LJ, Schumann G, Fornage M, Franke B, Debette S, Medland SE, Ikram MA, Thompson PM. Novel genetic loci underlying human intracranial volume identified through genome-wide association. Nat Neurosci. 2016 Dec;19(12):1569-1582. doi: 10.1038/nn.4398. Epub 2016 Oct 3. PMID: 27694991; PMCID: PMC5227112.

Marouli E, Graff M, Medina-Gomez C, Lo KS, Wood AR, Kjaer TR, Fine RS, Lu Y, Schurmann C, Highland HM, Rüeger S, Thorleifsson G, Justice AE, Lamparter D, Stirrups KE, Turcot V, Young KL, Winkler TW, Esko T, Karaderi T, Locke AE, Masca NG, Ng MC, Mudgal P, Rivas MA, Vedantam S, Mahajan A, Guo X, Abecasis G, Aben KK, Adair LS, Alam DS, Albrecht E, Allin KH, Allison M, Amouyel P, Appel EV, Arveiler D, Asselbergs FW, Auer PL, Balkau B, Banas B, Bang LE, Benn M, Bergmann S, Bielak LF, Blüher M, Boeing H, Boerwinkle E, Böger CA, Bonnycastle LL, Bork-Jensen J, Bots ML, Bottinger EP, Bowden DW, Brandslund I, Breen G, Brilliant MH, Broer L, Burt AA, Butterworth AS, Carey DJ, Caulfield MJ, Chambers JC, Chasman DI, Chen YI, Chowdhury R, Christensen C, Chu AY, Cocca M, Collins FS, Cook JP, Corley J, Galbany JC, Cox AJ, Cuellar-Partida G, Danesh J, Davies G, de Bakker PI, de Borst GJ, de Denus S, de Groot MC, de Mutsert R, Deary IJ, Dedoussis G, Demerath EW, den Hollander AI, Dennis JG, Di Angelantonio E, Drenos F, Du M, Dunning AM, Easton DF, Ebeling T, Edwards TL, Ellinor PT, Elliott P, Evangelou E, Farmaki AE, Faul JD, Feitosa MF, Feng S, Ferrannini E, Ferrario MM, Ferrieres J, Florez JC, Ford I, Fornage M, Franks PW, Frikke-Schmidt R, Galesloot TE, Gan W, Gandin I, Gasparini P, Giedraitis V, Giri A, Girotto G, Gordon SD, Gordon-Larsen P, Gorski M, Grarup N, Grove ML, Gudnason V, Gustafsson S, Hansen T, Harris KM, Harris TB, Hattersley AT, Hayward C, He L, Heid IM, Heikkilä K, Helgeland Ø, Hernesniemi J, Hewitt AW, Hocking LJ, Hollensted M, Holmen OL, Hovingh GK, Howson JM, Hoyng CB, Huang PL, Hveem K, Ikram MA, Ingelsson E, Jackson AU, Jansson JH, Jarvik GP, Jensen GB, Jhun MA, Jia Y, Jiang X, Johansson S, Jørgensen ME, Jørgensen T, Jousilahti P, Jukema JW, Kahali B, Kahn RS, Kähönen M, Kamstrup PR, Kanoni S, Kaprio J, Karaleftheri M, Kardia SL, Karpe F, Kee F, Keeman R, Kiemeney LA, Kitajima H, Kluivers KB, Kocher T, Komulainen P, Kontto J, Kooner JS, Kooperberg C, Kovacs P, Kriebel J, Kuivaniemi H, Küry S, Kuusisto J, La Bianca M, Laakso M, Lakka TA, Lange EM, Lange LA, Langefeld CD, Langenberg C, Larson EB, Lee IT, Lehtimäki T, Lewis CE, Li H, Li J, Li-Gao R, Lin H, Lin LA, Lin X, Lind L, Lindström J, Linneberg A, Liu Y, Liu Y, Lophatananon A, Luan J, Lubitz SA, Lyytikäinen LP, Mackey DA, Madden PA, Manning AK, Männistö S, Marenne G, Marten J, Martin NG, Mazul AL, Meidtner K, Metspalu A, Mitchell P, Mohlke KL, Mook-Kanamori DO, Morgan A, Morris AD, Morris AP, Müller-Nurasyid M, Munroe PB, Nalls MA, Nauck M, Nelson CP, Neville M, Nielsen SF, Nikus K, Njølstad PR, Nordestgaard BG, Ntalla I, O’Connel JR, Oksa H, Loohuis LM, Ophoff RA, Owen KR, Packard CJ, Padmanabhan S, Palmer CN, Pasterkamp G, Patel AP, Pattie A, Pedersen O, Peissig PL, Peloso GM, Pennell CE, Perola M, Perry JA, Perry JR, Person TN, Pirie A, Polasek O, Posthuma D, Raitakari OT, Rasheed A, Rauramaa R, Reilly DF, Reiner AP, Renström F, Ridker PM, Rioux JD, Robertson N, Robino A, Rolandsson O, Rudan I, Ruth KS, Saleheen D, Salomaa V, Samani NJ, Sandow K, Sapkota Y, Sattar N, Schmidt MK, Schreiner PJ, Schulze MB, Scott RA, Segura-Lepe MP, Shah S, Sim X, Sivapalaratnam S, Small KS, Smith AV, Smith JA, Southam L, Spector TD, Speliotes EK, Starr JM, Steinthorsdottir V, Stringham HM, Stumvoll M, Surendran P, ‘t Hart LM, Tansey KE, Tardif JC, Taylor KD, Teumer A, Thompson DJ, Thorsteinsdottir U, Thuesen BH, Tönjes A, Tromp G, Trompet S, Tsafantakis E, Tuomilehto J, Tybjaerg-Hansen A, Tyrer JP, Uher R, Uitterlinden AG, Ulivi S, van der Laan SW, Van Der Leij AR, van Duijn CM, van Schoor NM, van Setten J, Varbo A, Varga TV, Varma R, Edwards DR, Vermeulen SH, Vestergaard H, Vitart V, Vogt TF, Vozzi D, Walker M, Wang F, Wang CA, Wang S, Wang Y, Wareham NJ, Warren HR, Wessel J, Willems SM, Wilson JG, Witte DR, Woods MO, Wu Y, Yaghootkar H, Yao J, Yao P, Yerges-Armstrong LM, Young R, Zeggini E, Zhan X, Zhang W, Zhao JH, Zhao W, Zhao W, Zheng H, Zhou W; EPIC-InterAct Consortium; CHD Exome+ Consortium; ExomeBP Consortium; T2D-Genes Consortium; GoT2D Genes Consortium; Global Lipids Genetics Consortium; ReproGen Consortium; MAGIC Investigators, Rotter JI, Boehnke M, Kathiresan S, McCarthy MI, Willer CJ, Stefansson K, Borecki IB, Liu DJ, North KE, Heard-Costa NL, Pers TH, Lindgren CM, Oxvig C, Kutalik Z, Rivadeneira F, Loos RJ, Frayling TM, Hirschhorn JN, Deloukas P, Lettre G. Rare and low-frequency coding variants alter human adult height. Nature. 2017 Feb 9;542(7640):186-190. doi: 10.1038/nature21039. Epub 2017 Feb 1. PMID: 28146470; PMCID: PMC5302847.

Somers M, Olde Loohuis LM, Aukes MF, Pasaniuc B, de Visser KCL, Kahn RS, Sommer IE, Ophoff RA. A Genetic Population Isolate in The Netherlands Showing Extensive Haplotype Sharing and Long Regions of Homozygosity. Genes (Basel). 2017 May 4;8(5):133. doi: 10.3390/genes8050133. PMID: 28471380; PMCID: PMC5448007.

Olde Loohuis LM, Mangul S, Ori APS, Jospin G, Koslicki D, Yang HT, Wu T, Boks MP, Lomen-Hoerth C, Wiedau-Pazos M, Cantor RM, de Vos WM, Kahn RS, Eskin E, Ophoff RA. Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia. Transl Psychiatry. 2018 May 10;8(1):96. doi: 10.1038/s41398-018-0107-9. PMID: 29743478; PMCID: PMC5943399.

Vorstman JAS, Olde Loohuis LM; GROUP Investigators, Kahn RS, Ophoff RA; GROUP investigators. Double hits in schizophrenia. Hum Mol Genet. 2018 Aug 1;27(15):2755-2761. doi: 10.1093/hmg/ddy175. PMID: 29767709; PMCID: PMC6049008.

Loohuis LM, Albersen M, de Jong S, Wu T, Luykx JJ, Jans JJM, Verhoeven-Duif NM, Ophoff RA. The Alkaline Phosphatase (ALPL) Locus Is Associated with B6 Vitamer Levels in CSF and Plasma. Genes (Basel). 2018 Dec 22;10(1):8. doi: 10.3390/genes10010008. PMID: 30583557; PMCID: PMC6357176.

Stahl EA, Breen G, Forstner AJ, McQuillin A, Ripke S, Trubetskoy V, Mattheisen M, Wang Y, Coleman JRI, Gaspar HA, de Leeuw CA, Steinberg S, Pavlides JMW, Trzaskowski M, Byrne EM, Pers TH, Holmans PA, Richards AL, Abbott L, Agerbo E, Akil H, Albani D, Alliey-Rodriguez N, Als TD, Anjorin A, Antilla V, Awasthi S, Badner JA, Bækvad-Hansen M, Barchas JD, Bass N, Bauer M, Belliveau R, Bergen SE, Pedersen CB, Bøen E, Boks MP, Boocock J, Budde M, Bunney W, Burmeister M, Bybjerg-Grauholm J, Byerley W, Casas M, Cerrato F, Cervantes P, Chambert K, Charney AW, Chen D, Churchhouse C, Clarke TK, Coryell W, Craig DW, Cruceanu C, Curtis D, Czerski PM, Dale AM, de Jong S, Degenhardt F, Del-Favero J, DePaulo JR, Djurovic S, Dobbyn AL, Dumont A, Elvsåshagen T, Escott-Price V, Fan CC, Fischer SB, Flickinger M, Foroud TM, Forty L, Frank J, Fraser C, Freimer NB, Frisén L, Gade K, Gage D, Garnham J, Giambartolomei C, Pedersen MG, Goldstein J, Gordon SD, Gordon-Smith K, Green EK, Green MJ, Greenwood TA, Grove J, Guan W, Guzman-Parra J, Hamshere ML, Hautzinger M, Heilbronner U, Herms S, Hipolito M, Hoffmann P, Holland D, Huckins L, Jamain S, Johnson JS, Juréus A, Kandaswamy R, Karlsson R, Kennedy JL, Kittel-Schneider S, Knowles JA, Kogevinas M, Koller AC, Kupka R, Lavebratt C, Lawrence J, Lawson WB, Leber M, Lee PH, Levy SE, Li JZ, Liu C, Lucae S, Maaser A, MacIntyre DJ, Mahon PB, Maier W, Martinsson L, McCarroll S, McGuffin P, McInnis MG, McKay JD, Medeiros H, Medland SE, Meng F, Milani L, Montgomery GW, Morris DW, Mühleisen TW, Mullins N, Nguyen H, Nievergelt CM, Adolfsson AN, Nwulia EA, O’Donovan C, Loohuis LMO, Ori APS, Oruc L, Ösby U, Perlis RH, Perry A, Pfennig A, Potash JB, Purcell SM, Regeer EJ, Reif A, Reinbold CS, Rice JP, Rivas F, Rivera M, Roussos P, Ruderfer DM, Ryu E, Sánchez-Mora C, Schatzberg AF, Scheftner WA, Schork NJ, Shannon Weickert C, Shehktman T, Shilling PD, Sigurdsson E, Slaney C, Smeland OB, Sobell JL, Søholm Hansen C, Spijker AT, St Clair D, Steffens M, Strauss JS, Streit F, Strohmaier J, Szelinger S, Thompson RC, Thorgeirsson TE, Treutlein J, Vedder H, Wang W, Watson SJ, Weickert TW, Witt SH, Xi S, Xu W, Young AH, Zandi P, Zhang P, Zöllner S; eQTLGen Consortium; BIOS Consortium, Adolfsson R, Agartz I, Alda M, Backlund L, Baune BT, Bellivier F, Berrettini WH, Biernacka JM, Blackwood DHR, Boehnke M, Børglum AD, Corvin A, Craddock N, Daly MJ, Dannlowski U, Esko T, Etain B, Frye M, Fullerton JM, Gershon ES, Gill M, Goes F, Grigoroiu-Serbanescu M, Hauser J, Hougaard DM, Hultman CM, Jones I, Jones LA, Kahn RS, Kirov G, Landén M, Leboyer M, Lewis CM, Li QS, Lissowska J, Martin NG, Mayoral F, McElroy SL, McIntosh AM, McMahon FJ, Melle I, Metspalu A, Mitchell PB, Morken G, Mors O, Mortensen PB, Müller-Myhsok B, Myers RM, Neale BM, Nimgaonkar V, Nordentoft M, Nöthen MM, O’Donovan MC, Oedegaard KJ, Owen MJ, Paciga SA, Pato C, Pato MT, Posthuma D, Ramos-Quiroga JA, Ribasés M, Rietschel M, Rouleau GA, Schalling M, Schofield PR, Schulze TG, Serretti A, Smoller JW, Stefansson H, Stefansson K, Stordal E, Sullivan PF, Turecki G, Vaaler AE, Vieta E, Vincent JB, Werge T, Nurnberger JI, Wray NR, Di Florio A, Edenberg HJ, Cichon S, Ophoff RA, Scott LJ, Andreassen OA, Kelsoe J, Sklar P; Bipolar Disorder Working Group of the Psychiatric Genomics Consortium. Genome-wide association study identifies 30 loci associated with bipolar disorder. Nat Genet. 2019 May;51(5):793-803. doi: 10.1038/s41588-019-0397-8. Epub 2019 May 1. PMID: 31043756; PMCID: PMC6956732.

Locke AE, Steinberg KM, Chiang CWK, Service SK, Havulinna AS, Stell L, Pirinen M, Abel HJ, Chiang CC, Fulton RS, Jackson AU, Kang CJ, Kanchi KL, Koboldt DC, Larson DE, Nelson J, Nicholas TJ, Pietilä A, Ramensky V, Ray D, Scott LJ, Stringham HM, Vangipurapu J, Welch R, Yajnik P, Yin X, Eriksson JG, Ala-Korpela M, Järvelin MR, Männikkö M, Laivuori H; FinnGen Project, Dutcher SK, Stitziel NO, Wilson RK, Hall IM, Sabatti C, Palotie A, Salomaa V, Laakso M, Ripatti S, Boehnke M, Freimer NB. Exome sequencing of Finnish isolates enhances rare-variant association power. Nature. 2019 Aug;572(7769):323-328. Doi: 10.1038/s41586-019-1457-z. PMID: 31367044; PMCID: PMC6697530.

Levine ME, Hosgood HD, Chen B, Absher D, Assimes T, Horvath S. DNA methylation age of blood predicts future onset of lung cancer in the women’s health initiative. Aging (Albany NY). 2015 Sep;7(9):690-700. Doi: 10.18632/aging.100809. PMID: 26411804; PMCID: PMC4600626.

Levine ME, Lu AT, Bennett DA, Horvath S. Epigenetic age of the pre-frontal cortex is associated with neuritic plaques, amyloid load, and Alzheimer’s disease related cognitive functioning. Aging (Albany NY). 2015 Dec;7(12):1198-211. Doi: 10.18632/aging.100864. PMID: 26684672; PMCID: PMC4712342.

Lu AT, Hannon E, Levine ME, Hao K, Crimmins EM, Lunnon K, Kozlenkov A, Mill J, Dracheva S, Horvath S. Genetic variants near MLST8 and DHX57 affect the epigenetic age of the cerebellum. Nat Commun. 2016 Feb 2;7:10561. Doi: 10.1038/ncomms10561. PMID: 26830004; PMCID: PMC4740877.

Levine ME, Lu AT, Chen BH, Hernandez DG, Singleton AB, Ferrucci L, Bandinelli S, Salfati E, Manson JE, Quach A, Kusters CD, Kuh D, Wong A, Teschendorff AE, Widschwendter M, Ritz BR, Absher D, Assimes TL, Horvath S. Menopause accelerates biological aging. Proc Natl Acad Sci U S A. 2016 Aug 16;113(33):9327-32. Doi: 10.1073/pnas.1604558113. Epub 2016 Jul 25. PMID: 27457926; PMCID: PMC4995944.

Horvath S, Gurven M, Levine ME, Trumble BC, Kaplan H, Allayee H, Ritz BR, Chen B, Lu AT, Rickabaugh TM, Jamieson BD, Sun D, Li S, Chen W, Quintana-Murci L, Fagny M, Kobor MS, Tsao PS, Reiner AP, Edlefsen KL, Absher D, Assimes TL. An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease. Genome Biol. 2016 Aug 11;17(1):171. Doi: 10.1186/s13059-016-1030-0. PMID: 27511193; PMCID: PMC4980791.

Chen BH, Marioni RE, Colicino E, Peters MJ, Ward-Caviness CK, Tsai PC, Roetker NS, Just AC, Demerath EW, Guan W, Bressler J, Fornage M, Studenski S, Vandiver AR, Moore AZ, Tanaka T, Kiel DP, Liang L, Vokonas P, Schwartz J, Lunetta KL, Murabito JM, Bandinelli S, Hernandez DG, Melzer D, Nalls M, Pilling LC, Price TR, Singleton AB, Gieger C, Holle R, Kretschmer A, Kronenberg F, Kunze S, Linseisen J, Meisinger C, Rathmann W, Waldenberger M, Visscher PM, Shah S, Wray NR, McRae AF, Franco OH, Hofman A, Uitterlinden AG, Absher D, Assimes T, Levine ME, Lu AT, Tsao PS, Hou L, Manson JE, Carty CL, LaCroix AZ, Reiner AP, Spector TD, Feinberg AP, Levy D, Baccarelli A, van Meurs J, Bell JT, Peters A, Deary IJ, Pankow JS, Ferrucci L, Horvath S. DNA methylation-based measures of biological age: meta-analysis predicting time to death. Aging (Albany NY). 2016 Sep 28;8(9):1844-1865. Doi: 10.18632/aging.101020. PMID: 27690265; PMCID: PMC5076441.

Quach A, Levine ME, Tanaka T, Lu AT, Chen BH, Ferrucci L, Ritz B, Bandinelli S, Neuhouser ML, Beasley JM, Snetselaar L, Wallace RB, Tsao PS, Absher D, Assimes TL, Stewart JD, Li Y, Hou L, Baccarelli AA, Whitsel EA, Horvath S. Epigenetic clock analysis of diet, exercise, education, and lifestyle factors. Aging (Albany NY). 2017 Feb 14;9(2):419-446. Doi: 10.18632/aging.101168. PMID: 28198702; PMCID: PMC5361673.

Levine ME, Langfelder P, Horvath S. A Weighted SNP Correlation Network Method for Estimating Polygenic Risk Scores. Methods Mol Biol. 2017;1613:277-290. Doi: 10.1007/978-1-4939-7027-8_10. PMID: 28849564; PMCID: PMC5998804.

Lu AT, Xue L, Salfati EL, Chen BH, Ferrucci L, Levy D, Joehanes R, Murabito JM, Kiel DP, Tsai PC, Yet I, Bell JT, Mangino M, Tanaka T, McRae AF, Marioni RE, Visscher PM, Wray NR, Deary IJ, Levine ME, Quach A, Assimes T, Tsao PS, Absher D, Stewart JD, Li Y, Reiner AP, Hou L, Baccarelli AA, Whitsel EA, Aviv A, Cardona A, Day FR, Wareham NJ, Perry JRB, Ong KK, Raj K, Lunetta KL, Horvath S. GWAS of epigenetic aging rates in blood reveals a critical role for TERT. Nat Commun. 2018 Jan 26;9(1):387. Doi: 10.1038/s41467-017-02697-5. PMID: 29374233; PMCID: PMC5786029.

Levine ME, Lu AT, Quach A, Chen BH, Assimes TL, Bandinelli S, Hou L, Baccarelli AA, Stewart JD, Li Y, Whitsel EA, Wilson JG, Reiner AP, Aviv A, Lohman K, Liu Y, Ferrucci L, Horvath S. An epigenetic biomarker of aging for lifespan and healthspan. Aging (Albany NY). 2018 Apr 18;10(4):573-591. Doi: 10.18632/aging.101414. PMID: 29676998; PMCID: PMC5940111.

Ruzzo EK, Geschwind DH. Schizophrenia genetics complements its mechanistic understanding. Nat Neurosci. 2016 Apr;19(4):523-5. doi: 10.1038/nn.4277. Epub 2016 Mar 21. PMID: 26998600; PMCID: PMC5310675.

Heimer G, Eyal E, Zhu X, Ruzzo EK, Marek-Yagel D, Sagiv D, Anikster Y, Reznik-Wolf H, Pras E, Oz Levi D, Lancet D, Ben-Zeev B, Nissenkorn A. Mutations in AIFM1 cause an X-linked childhood cerebellar ataxia partially responsive to riboflavin. Eur J Paediatr Neurol. 2018 Jan;22(1):93-101. doi: 10.1016/j.ejpn.2017.09.004. Epub 2017 Sep 15. PMID: 28967629.

Oz-Levi D, Olender T, Bar-Joseph I, Zhu Y, Marek-Yagel D, Barozzi I, Osterwalder M, Alkelai A, Ruzzo EK, Han Y, Vos ESM, Reznik-Wolf H, Hartman C, Shamir R, Weiss B, Shapiro R, Pode-Shakked B, Tatarskyy P, Milgrom R, Schvimer M, Barshack I, Imai DM, Coleman-Derr D, Dickel DE, Nord AS, Afzal V, van Bueren KL, Barnes RM, Black BL, Mayhew CN, Kuhar MF, Pitstick A, Tekman M, Stanescu HC, Wells JM, Kleta R, de Laat W, Goldstein DB, Pras E, Visel A, Lancet D, Anikster Y, Pennacchio LA. Noncoding deletions reveal a gene that is critical for intestinal function. Nature. 2019 Jul;571(7763):107-111. doi: 10.1038/s41586-019-1312-2. Epub 2019 Jun 19. PMID: 31217582; PMCID: PMC7061489.

Polioudakis D, de la Torre-Ubieta L, Langerman J, Elkins AG, Shi X, Stein JL, Vuong CK, Nichterwitz S, Gevorgian M, Opland CK, Lu D, Connell W, Ruzzo EK, Lowe JK, Hadzic T, Hinz FI, Sabri S, Lowry WE, Gerstein MB, Plath K, Geschwind DH. A Single-Cell Transcriptomic Atlas of Human Neocortical Development during Mid-gestation. Neuron. 2019 Sep 4;103(5):785-801.e8. doi: 10.1016/j.neuron.2019.06.011. Epub 2019 Jul 11. PMID: 31303374; PMCID: PMC6831089.

Ruzzo EK, Pérez-Cano L, Jung JY, Wang LK, Kashef-Haghighi D, Hartl C, Singh C, Xu J, Hoekstra JN, Leventhal O, Leppä VM, Gandal MJ, Paskov K, Stockham N, Polioudakis D, Lowe JK, Prober DA, Geschwind DH, Wall DP. Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks. Cell. 2019 Aug 8;178(4):850-866.e26. doi: 10.1016/j.cell.2019.07.015. PMID: 31398340; PMCID: PMC7102900.

Michalet X, Colyer RA, Scalia G, Kim T, Levi M, Aharoni D, Cheng A, Guerrieri F, Arisaka K, Millaud J, Rech I, Resnati D, Marangoni S, Gulinatti A, Ghioni M, Tisa S, Zappa F, Cova S, Weiss S. High-throughput single-molecule fluorescence spectroscopy using parallel detection. Proc SPIE Int Soc Opt Eng. 2010 Jan 24;7608(76082D):76082D_1. Doi: 10.1117/12.846784. PMID: 21625288; PMCID: PMC3103226.

Ravassard P, Kees A, Willers B, Ho D, Aharoni DB, Cushman J, Aghajan ZM, Mehta MR. Multisensory control of hippocampal spatiotemporal selectivity. Science. 2013 Jun 14;340(6138):1342-1346. Doi: 10.1126/science.1232655. Epub 2013 May 2. PMID: 23641063; PMCID: PMC4049564.

Cushman JD, Aharoni DB, Willers B, Ravassard P, Kees A, Vuong C, Popeney B, Arisaka K, Mehta MR. Multisensory control of multimodal behavior: do the legs know what the tongue is doing? PloS One. 2013 Nov 4;8(11):e80465. Doi: 10.1371/journal.pone.0080465. PMID: 24224054; PMCID: PMC3817119.

Shtrahman M, Aharoni DB, Hardy NF, Buonomano DV, Arisaka K, Otis TS. Multifocal fluorescence microscope for fast optical recordings of neuronal action potentials. Biophys J. 2015 Feb 3;108(3):520-9. Doi: 10.1016/j.bpj.2014.12.005. PMID: 25650920; PMCID: PMC4317551.

Cai DJ, Aharoni D, Shuman T, Shobe J, Biane J, Song W, Wei B, Veshkini M, La-Vu M, Lou J, Flores SE, Kim I, Sano Y, Zhou M, Baumgaertel K, Lavi A, Kamata M, Tuszynski M, Mayford M, Golshani P, Silva AJ. A shared neural ensemble links distinct contextual memories encoded close in time. Nature. 2016 Jun 2;534(7605):115-8. Doi: 10.1038/nature17955. Epub 2016 May 23. PMID: 27251287; PMCID: PMC5063500.

Van Driesche SJ, Martin KC. New frontiers in RNA transport and local translation in neurons. Dev Neurobiol. 2018 Mar;78(3):331-339. doi: 10.1002/dneu.22574. Epub 2018 Jan 28. Review. PMID: 29314718. PMCID in progress

Appointed 2009 - 2013

Schneider M, Debbané M, Bassett AS, Chow EW, Fung WL, van den Bree M, Owen M, Murphy KC, Niarchou M, Kates WR, Antshel KM, Fremont W, McDonald-McGinn DM, Gur RE, Zackai EH, Vorstman J, Duijff SN, Klaassen PW, Swillen A, Gothelf D, Green T, Weizman A, Van Amelsvoort T, Evers L, Boot E, Shashi V, Hooper SR, Bearden CE, Jalbrzikowski M, Armando M, Vicari S, Murphy DG, Ousley O, Campbell LE, Simon TJ, Eliez S; International Consortium on Brain and Behavior in 22q11.2 Deletion Syndrome. Psychiatric disorders from childhood to adulthood in 22q11.2 deletion syndrome: results from the International Consortium on Brain and Behavior in 22q11.2 Deletion Syndrome. Am J Psychiatry. 2014 Jun;171(6):627-39. Doi: 10.1176/appi.ajp.2013.13070864. PMID: 24577245; PMCID: PMC4285461.

Jalbrzikowski M, Lazaro MT, Gao F, Huang A, Chow C, Geschwind DH, Coppola G, Bearden CE. Transcriptome Profiling of Peripheral Blood in 22q11.2 Deletion Syndrome Reveals Functional Pathways Related to Psychosis and Autism Spectrum Disorder. PloS One. 2015 Jul 22;10(7):e0132542. Doi: 10.1371/journal.pone.0132542. PMID: 26201030; PMCID: PMC4511766.

Snead NM, Wu X, Li A, Cui Q, Sakurai K, Burnett JC, Rossi JJ. Molecular basis for improved gene silencing by Dicer substrate interfering RNA compared with other siRNA variants. Nucleic Acids Res. 2013 Jul;41(12):6209-21. Doi: 10.1093/nar/gkt200. Epub 2013 Apr 24. PMID: 23620279; PMCID: PMC3695504.

de la Torre-Ubieta L, Gaudillière B, Yang Y, Ikeuchi Y, Yamada T, DiBacco S, Stegmüller J, Schüller U, Salih DA, Rowitch D, Brunet A, Bonni A. A FOXO-Pak1 transcriptional pathway controls neuronal polarity. Genes Dev. 2010 Apr 15;24(8):799-813. Doi: 10.1101/gad.1880510. PMID: 20395366; PMCID: PMC2854394.

Bilimoria PM, de la Torre-Ubieta L, Ikeuchi Y, Becker EB, Reiner O, Bonni A. A JIP3-regulated GSK3β/DCX signaling pathway restricts axon branching. J Neurosci. 2010 Dec 15;30(50):16766-76. Doi: 10.1523/JNEUROSCI.1362-10.2010. PMID: 21159948; PMCID: PMC3409248.

Salih DA, Rashid AJ, Colas D, de la Torre-Ubieta L, Zhu RP, Morgan AA, Santo EE, Ucar D, Devarajan K, Cole CJ, Madison DV, Shamloo M, Butte AJ, Bonni A, Josselyn SA, Brunet A. FoxO6 regulates memory consolidation and synaptic function. Genes Dev. 2012 Dec 15;26(24):2780-801. Doi: 10.1101/gad.208926.112. Epub 2012 Dec 7. PMID: 23222102; PMCID: PMC3533081.

Ikeuchi Y, de la Torre-Ubieta L, Matsuda T, Steen H, Okazawa H, Bonni A. The XLID protein PQBP1 and the GTPase Dynamin 2 define a signaling link that orchestrates ciliary morphogenesis in postmitotic neurons. Cell Rep. 2013 Sep 12;4(5):879-89. Doi: 10.1016/j.celrep.2013.07.042. Epub 2013 Aug 29. PMID: 23994472; PMCID: PMC4013279.

Mejia LA, Litterman N, Ikeuchi Y, de la Torre-Ubieta L, Bennett EJ, Zhang C, Harper JW, Bonni A. A novel Hap1-Tsc1 interaction regulates neuronal mTORC1 signaling and morphogenesis in the brain. J Neurosci. 2013 Nov 13;33(46):18015-21. Doi: 10.1523/JNEUROSCI.2290-13.2013. PMID: 24227713; PMCID: PMC3828457.

Stein JL, de la Torre-Ubieta L, Tian Y, Parikshak NN, Hernández IA, Marchetto MC, Baker DK, Lu D, Hinman CR, Lowe JK, Wexler EM, Muotri AR, Gage FH, Kosik KS, Geschwind DH. A quantitative framework to evaluate modeling of cortical development by neural stem cells. Neuron. 2014 Jul 2;83(1):69-86. Doi: 10.1016/j.neuron.2014.05.035. PMID: 24991955; PMCID: PMC4277209.

De la Torre-Ubieta L, Won H, Stein JL, Geschwind DH. Advancing the understanding of autism disease mechanisms through genetics. Nat Med. 2016 Apr;22(4):345-61. Doi: 10.1038/nm.4071. PMID: 27050589; PMCID: PMC5072455.

Chiocchetti AG, Haslinger D, Stein JL, de la Torre-Ubieta L, Cocchi E, Rothämel T, Lindlar S, Waltes R, Fulda S, Geschwind DH, Freitag CM. Transcriptomic signatures of neuronal differentiation and their association with risk genes for autism spectrum and related neuropsychiatric disorders. Transl Psychiatry. 2016 Aug 2;6(8):e864. Doi: 10.1038/tp.2016.119. PMID: 27483382; PMCID: PMC5022076.

Won H, de la Torre-Ubieta L, Stein JL, Parikshak NN, Huang J, Opland CK, Gandal MJ, Sutton GJ, Hormozdiari F, Lu D, Lee C, Eskin E, Voineagu I, Ernst J, Geschwind DH. Chromosome conformation elucidates regulatory relationships in developing human brain. Nature. 2016 Oct 27;538(7626):523-527. Doi: 10.1038/nature19847. Epub 2016 Oct 19. PMID: 27760116; PMCID: PMC5358922.

Parikshak NN, Swarup V, Belgard TG, Irimia M, Ramaswami G, Gandal MJ, Hartl C, Leppa V, Ubieta LT, Huang J, Lowe JK, Blencowe BJ, Horvath S, Geschwind DH. Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism. Nature. 2016 Dec 15;540(7633):423-427. Doi: 10.1038/nature20612. PMID: 27919067; PMCID: PMC7102905.

Young-Wolff KC, Kendler KS, Ericson ML, Prescott CA. Accounting for the association between childhood maltreatment and alcohol-use disorders in males: a twin study. Psychol Med. 2011 Jan;41(1):59-70. doi: 10.1017/S0033291710000425. Epub 2010 Mar 29. PMID: 20346194; PMCID: PMC3010204.

Ericson M, Tuvblad C, Raine A, Young-Wolff K, Baker LA. Heritability and longitudinal stability of schizotypal traits during adolescence. Behav Genet. 2011 Jul;41(4):499-511. doi: 10.1007/s10519-010-9401-x. Epub 2011 Mar 3. PMID: 21369821; PMCID: PMC3123391.

Fears SC, Service SK, Kremeyer B, Araya C, Araya X, Bejarano J, Ramirez M, Castrillón G, Gomez-Franco J, Lopez MC, Montoya G, Montoya P, Aldana I, Teshiba TM, Abaryan Z, Al-Sharif NB, Ericson M, Jalbrzikowski M, Luykx JJ, Navarro L, Tishler TA, Altshuler L, Bartzokis G, Escobar J, Glahn DC, Ospina-Duque J, Risch N, Ruiz-Linares A, Thompson PM, Cantor RM, Lopez-Jaramillo C, Macaya G, Molina J, Reus VI, Sabatti C, Freimer NB, Bearden CE. Multisystem component phenotypes of bipolar disorder for genetic investigations of extended pedigrees. JAMA Psychiatry. 2014 Apr;71(4):375-87. doi: 10.1001/jamapsychiatry.2013.4100. PMID: 24522887; PMCID: PMC4045237.

Sha SJ, Takada LT, Rankin KP, Yokoyama JS, Rutherford NJ, Fong JC, Khan B, Karydas A, Baker MC, DeJesus-Hernandez M, Pribadi M, Coppola G, Geschwind DH, Rademakers R, Lee SE, Seeley W, Miller BL, Boxer AL. Frontotemporal dementia due to C9ORF72 mutations: clinical and imaging features. Neurology. 2012 Sep 4;79(10):1002-11. Doi: 10.1212/WNL.0b013e318268452e. Epub 2012 Aug 8. PMID: 22875087; PMCID: PMC3430713.

Fogel BL, Pribadi M, Pi S, Perlman SL, Geschwind DH, Coppola G. C9ORF72 expansion is not a significant cause of sporadic spinocerebellar ataxia. Mov Disord. 2012 Dec;27(14):1832-3. Doi: 10.1002/mds.25245. Epub 2012 Oct 18. PMID: 23080112; PMCID: PMC3536912.

Ponting CP, Belgard TG. Transcribed dark matter: meaning or myth? Hum Mol Genet. 2010 Oct 15;19(R2):R162-8. Doi: 10.1093/hmg/ddq362. Epub 2010 Aug 25. PMID: 20798109; PMCID: PMC2953743.

Belgard TG, Marques AC, Oliver PL, Abaan HO, Sirey TM, Hoerder-Suabedissen A, García-Moreno F, Molnár Z, Margulies EH, Ponting CP. A transcriptomic atlas of mouse neocortical layers. Neuron. 2011 Aug 25;71(4):605-16. Doi: 10.1016/j.neuron.2011.06.039. PMID: 21867878; PMCID: PMC3163272.

Keane TM, Goodstadt L, Danecek P, White MA, Wong K, Yalcin B, Heger A, Agam A, Slater G, Goodson M, Furlotte NA, Eskin E, Nellåker C, Whitley H, Cleak J, Janowitz D, Hernandez-Pliego P, Edwards A, Belgard TG, Oliver PL, McIntyre RE, Bhomra A, Nicod J, Gan X, Yuan W, van der Weyden L, Steward CA, Bala S, Stalker J, Mott R, Durbin R, Jackson IJ, Czechanski A, Guerra-Assunção JA, Donahue LR, Reinholdt LG, Payseur BA, Ponting CP, Birney E, Flint J, Adams DJ. Mouse genomic variation and its effect on phenotypes and gene regulation. Nature. 2011 Sep 14;477(7364):289-94. Doi: 10.1038/nature10413. PMID: 21921910; PMCID: PMC3276836.

Nellåker C, Keane TM, Yalcin B, Wong K, Agam A, Belgard TG, Flint J, Adams DJ, Frankel WN, Ponting CP. The genomic landscape shaped by selection on transposable elements across 18 mouse strains. Genome Biol. 2012 Jun 15;13(6):R45. Doi: 10.1186/gb-2012-13-6-r45. PMID: 22703977; PMCID: PMC3446317.

Belgard TG, Geschwind DH. Retooling spare parts: gene duplication and cognition. Nat Neurosci. 2013 Jan;16(1):6-8. Doi: 10.1038/nn.3292. PMID: 23257927; PMCID: PMC4090687.

Hoerder-Suabedissen A, Oeschger FM, Krishnan ML, Belgard TG, Wang WZ, Lee S, Webber C, Petretto E, Edwards AD, Molnár Z. Expression profiling of mouse subplate reveals a dynamic gene network and disease association with autism and schizophrenia. Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3555-60. Doi: 10.1073/pnas.1218510110. Epub 2013 Feb 11. PMID: 23401504; PMCID: PMC3587197.

Belgard TG, Jankovic I, Lowe JK, Geschwind DH. Population structure confounds autism genetic classifier. Mol Psychiatry. 2014 Apr;19(4):405-7. Doi: 10.1038/mp.2013.34. Epub 2013 Apr 2. PMID: 23546168; PMCID: PMC4123206.

Wang GZ, Belgard TG, Mao D, Chen L, Berto S, Preuss TM, Lu H, Geschwind DH, Konopka G. Correspondence between Resting-State Activity and Brain Gene Expression. Neuron. 2015 Nov 18;88(4):659-66. Doi: 10.1016/j.neuron.2015.10.022. PMID: 26590343; PMCID: PMC4694561.

Warren WC, Jasinska AJ, García-Pérez R, Svardal H, Tomlinson C, Rocchi M, Archidiacono N, Capozzi O, Minx P, Montague MJ, Kyung K, Hillier LW, Kremitzki M, Graves T, Chiang C, Hughes J, Tran N, Huang Y, Ramensky V, Choi OW, Jung YJ, Schmitt CA, Juretic N, Wasserscheid J, Turner TR, Wiseman RW, Tuscher JJ, Karl JA, Schmitz JE, Zahn R, O’Connor DH, Redmond E, Nisbett A, Jacquelin B, Müller-Trutwin MC, Brenchley JM, Dione M, Antonio M, Schroth GP, Kaplan JR, Jorgensen MJ, Thomas GW, Hahn MW, Raney BJ, Aken B, Nag R, Schmitz J, Churakov G, Noll A, Stanyon R, Webb D, Thibaud-Nissen F, Nordborg M, Marques-Bonet T, Dewar K, Weinstock GM, Wilson RK, Freimer NB. The genome of the vervet (Chlorocebus aethiops sabaeus). Genome Res. 2015 Dec;25(12):1921-33. Doi: 10.1101/gr.192922.115. Epub 2015 Sep 16. PMID: 26377836; PMCID: PMC4665013.

Ma D, Jasinska A, Kristoff J, Grobler JP, Turner T, Jung Y, Schmitt C, Raehtz K, Feyertag F, Martinez Sosa N, Wijewardana V, Burke DS, Robertson DL, Tracy R, Pandrea I, Freimer N, Apetrei C; International Vervet Research Consortium. SIVagm infection in wild African green monkeys from South Africa: epidemiology, natural history, and evolutionary considerations. PloS Pathog. 2013 Jan;9(1):e1003011. Doi: 10.1371/journal.ppat.1003011. Epub 2013 Jan 17. PMID: 23349627; PMCID: PMC3547836.

Jasinska AJ, Schmitt CA, Service SK, Cantor RM, Dewar K, Jentsch JD, Kaplan JR, Turner TR, Warren WC, Weinstock GM, Woods RP, Freimer NB. Systems biology of the vervet monkey. ILAR J. 2013;54(2):122-43. Doi: 10.1093/ilar/ilt049. PMID: 24174437; PMCID: PMC3814400.

Wexler EM, Rosen E, Lu D, Osborn GE, Martin E, Raybould H, Geschwind DH. Genome-wide analysis of a Wnt1-regulated transcriptional network implicates neurodegenerative pathways. Sci Signal. 2011 Oct 4;4(193):ra65. Doi: 10.1126/scisignal.2002282. PMID: 21971039; PMCID: PMC3856943.

Konopka G, Wexler E, Rosen E, Mukamel Z, Osborn GE, Chen L, Lu D, Gao F, Gao K, Lowe JK, Geschwind DH. Modeling the functional genomics of autism using human neurons. Mol Psychiatry. 2012 Feb;17(2):202-14. Doi: 10.1038/mp.2011.60. Epub 2011 Jun 7. PMID: 21647150; PMCID: PMC3170664.

Rosen EY, Wexler EM, Versano R, Coppola G, Gao F, Winden KD, Oldham MC, Martens LH, Zhou P, Farese RV Jr, Geschwind DH. Functional genomic analyses identify pathways dysregulated by progranulin deficiency, implicating Wnt signaling. Neuron. 2011 Sep 22;71(6):1030-42. Doi: 10.1016/j.neuron.2011.07.021. Epub 2011 Sep 21. PMID: 21943601; PMCID: PMC3633414.

Joshi AA, Leporé N, Joshi SH, Lee AD, Barysheva M, Stein JL, McMahon KL, Johnson K, de Zubicaray GI, Martin NG, Wright MJ, Toga AW, Thompson PM. The contribution of genes to cortical thickness and volume. Neuroreport. 2011 Feb 16;22(3):101-5. Doi: 10.1097/WNR.0b013e3283424c84. PMID: 21233781; PMCID: PMC3079384.

Hibar DP, Stein JL, Kohannim O, Jahanshad N, Saykin AJ, Shen L, Kim S, Pankratz N, Foroud T, Huentelman MJ, Potkin SG, Jack CR Jr, Weiner MW, Toga AW, Thompson PM; Alzheimer’s Disease Neuroimaging Initiative. Voxelwise gene-wide association study (vGeneWAS): multivariate gene-based association testing in 731 elderly subjects. Neuroimage. 2011 Jun 15;56(4):1875-91. Doi: 10.1016/j.neuroimage.2011.03.077. Epub 2011 Apr 8. PMID: 21497199; PMCID: PMC3366726.

Marenco S, Stein JL, Savostyanova AA, Sambataro F, Tan HY, Goldman AL, Verchinski BA, Barnett AS, Dickinson D, Apud JA, Callicott JH, Meyer-Lindenberg A, Weinberger DR. Investigation of anatomical thalamo-cortical connectivity and FMRI activation in schizophrenia. Neuropsychopharmacology. 2012 Jan;37(2):499-507. Doi: 10.1038/npp.2011.215. Epub 2011 Sep 28. PMID: 21956440; PMCID: PMC3242311.

Hibar DP, Kohannim O, Stein JL, Chiang MC, Thompson PM. Multilocus genetic analysis of brain images. Front Genet. 2011 Oct 21;2:73. Doi: 10.3389/fgene.2011.00073. PMID: 22303368; PMCID: PMC3268626.

Kochunov P, Glahn DC, Nichols TE, Winkler AM, Hong EL, Holcomb HH, Stein JL, Thompson PM, Curran JE, Carless MA, Olvera RL, Johnson MP, Cole SA, Kochunov V, Kent J, Blangero J. Genetic analysis of cortical thickness and fractional anisotropy of water diffusion in the brain. Front Neurosci. 2011 Oct 19;5:120. Doi: 10.3389/fnins.2011.00120. PMID: 22028680; PMCID: PMC3199541.

Vounou M, Janousova E, Wolz R, Stein JL, Thompson PM, Rueckert D, Montana G; Alzheimer’s Disease Neuroimaging Initiative. Sparse reduced-rank regression detects genetic associations with voxel-wise longitudinal phenotypes in Alzheimer’s disease. Neuroimage. 2012 Mar;60(1):700-16. Doi: 10.1016/j.neuroimage.2011.12.029. Epub 2011 Dec 22. PMID: 22209813; PMCID: PMC3551466.

J Jahanshad N, Kohannim O, Hibar DP, Stein JL, McMahon KL, de Zubicaray GI, Medland SE, Montgomery GW, Whitfield JB, Martin NG, Wright MJ, Toga AW, Thompson PM. Brain structure in healthy adults is related to serum transferrin and the H63D polymorphism in the HFE gene. Proc Natl Acad Sci U S A. 2012 Apr 3;109(14):E851-9. Doi: 10.1073/pnas.1105543109. Epub 2012 Jan 9. PMID: 22232660; PMCID: PMC3325658.

Braskie MN, Jahanshad N, Stein JL, Barysheva M, Johnson K, McMahon KL, de Zubicaray GI, Martin NG, Wright MJ, Ringman JM, Toga AW, Thompson PM. Relationship of a variant in the NTRK1 gene to white matter microstructure in young adults. J Neurosci. 2012 Apr 25;32(17):5964-72. Doi: 10.1523/JNEUROSCI.5561-11.2012. PMID: 22539856; PMCID: PMC3393752.

Sanders SJ, Murtha MT, Gupta AR, Murdoch JD, Raubeson MJ, Willsey AJ, Ercan-Sencicek AG, DiLullo NM, Parikshak NN, Stein JL, Walker MF, Ober GT, Teran NA, Song Y, El-Fishawy P, Murtha RC, Choi M, Overton JD, Bjornson RD, Carriero NJ, Meyer KA, Bilguvar K, Mane SM, Sestan N, Lifton RP, Günel M, Roeder K, Geschwind DH, Devlin B, State MW. De novo mutations revealed by whole-exome sequencing are strongly associated with autism. Nature. 2012 Apr 4;485(7397):237-41. Doi: 10.1038/nature10945. PMID: 22495306; PMCID: PMC3667984.

Stein JL, Medland SE, Vasquez AA, Hibar DP, Senstad RE, Winkler AM, Toro R, Appel K, Bartecek R, Bergmann Ø, Bernard M, Brown AA, Cannon DM, Chakravarty MM, Christoforou A, Domin M, Grimm O, Hollinshead M, Holmes AJ, Homuth G, Hottenga JJ, Langan C, Lopez LM, Hansell NK, Hwang KS, Kim S, Laje G, Lee PH, Liu X, Loth E, Lourdusamy A, Mattingsdal M, Mohnke S, Maniega SM, Nho K, Nugent AC, O’Brien C, Papmeyer M, Pütz B, Ramasamy A, Rasmussen J, Rijpkema M, Risacher SL, Roddey JC, Rose EJ, Ryten M, Shen L, Sprooten E, Strengman E, Teumer A, Trabzuni D, Turner J, van Eijk K, van Erp TG, van Tol MJ, Wittfeld K, Wolf C, Woudstra S, Aleman A, Alhusaini S, Almasy L, Binder EB, Brohawn DG, Cantor RM, Carless MA, Corvin A, Czisch M, Curran JE, Davies G, de Almeida MA, Delanty N, Depondt C, Duggirala R, Dyer TD, Erk S, Fagerness J, Fox PT, Freimer NB, Gill M, Göring HH, Hagler DJ, Hoehn D, Holsboer F, Hoogman M, Hosten N, Jahanshad N, Johnson MP, Kasperaviciute D, Kent JW Jr, Kochunov P, Lancaster JL, Lawrie SM, Liewald DC, Mandl R, Matarin M, Mattheisen M, Meisenzahl E, Melle I, Moses EK, Mühleisen TW, Nauck M, Nöthen MM, Olvera RL, Pandolfo M, Pike GB, Puls R, Reinvang I, Rentería ME, Rietschel M, Roffman JL, Royle NA, Rujescu D, Savitz J, Schnack HG, Schnell K, Seiferth N, Smith C, Steen VM, Valdés Hernández MC, Van den Heuvel M, van der Wee NJ, Van Haren NE, Veltman JA, Völzke H, Walker R, Westlye LT, Whelan CD, Agartz I, Boomsma DI, Cavalleri GL, Dale AM, Djurovic S, Drevets WC, Hagoort P, Hall J, Heinz A, Jack CR Jr, Foroud TM, Le Hellard S, Macciardi F, Montgomery GW, Poline JB, Porteous DJ, Sisodiya SM, Starr JM, Sussmann J, Toga AW, Veltman DJ, Walter H, Weiner MW; Alzheimer’s Disease Neuroimaging Initiative; EPIGEN Consortium; IMAGEN Consortium; Saguenay Youth Study Group, Bis JC, Ikram MA, Smith AV, Gudnason V, Tzourio C, Vernooij MW, Launer LJ, DeCarli C, Seshadri S; Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium, Andreassen OA, Apostolova LG, Bastin ME, Blangero J, Brunner HG, Buckner RL, Cichon S, Coppola G, de Zubicaray GI, Deary IJ, Donohoe G, de Geus EJ, Espeseth T, Fernández G, Glahn DC, Grabe HJ, Hardy J, Hulshoff Pol HE, Jenkinson M, Kahn RS, McDonald C, McIntosh AM, McMahon FJ, McMahon KL, Meyer-Lindenberg A, Morris DW, Müller-Myhsok B, Nichols TE, Ophoff RA, Paus T, Pausova Z, Penninx BW, Potkin SG, Sämann PG, Saykin AJ, Schumann G, Smoller JW, Wardlaw JM, Weale ME, Martin NG, Franke B, Wright MJ, Thompson PM; Enhancing Neuro Imaging Genetics through Meta-Analysis Consortium. Identification of common variants associated with human hippocampal and intracranial volumes. Nat Genet. 2012 Apr 15;44(5):552-61. Doi: 10.1038/ng.2250. PMID: 22504417; PMCID: PMC3635491.

Bis JC, DeCarli C, Smith AV, van der Lijn F, Crivello F, Fornage M, Debette S, Shulman JM, Schmidt H, Srikanth V, Schuur M, Yu L, Choi SH, Sigurdsson S, Verhaaren BF, DeStefano AL, Lambert JC, Jack CR Jr, Struchalin M, Stankovich J, Ibrahim-Verbaas CA, Fleischman D, Zijdenbos A, den Heijer T, Mazoyer B, Coker LH, Enzinger C, Danoy P, Amin N, Arfanakis K, van Buchem MA, de Bruijn RF, Beiser A, Dufouil C, Huang J, Cavalieri M, Thomson R, Niessen WJ, Chibnik LB, Gislason GK, Hofman A, Pikula A, Amouyel P, Freeman KB, Phan TG, Oostra BA, Stein JL, Medland SE, Vasquez AA, Hibar DP, Wright MJ, Franke B, Martin NG, Thompson PM; Enhancing Neuro Imaging Genetics through Meta-Analysis Consortium, Nalls MA, Uitterlinden AG, Au R, Elbaz A, Beare RJ, van Swieten JC, Lopez OL, Harris TB, Chouraki V, Breteler MM, De Jager PL, Becker JT, Vernooij MW, Knopman D, Fazekas F, Wolf PA, van der Lugt A, Gudnason V, Longstreth WT Jr, Brown MA, Bennett DA, van Duijn CM, Mosley TH, Schmidt R, Tzourio C, Launer LJ, Ikram MA, Seshadri S; Cohorts for Heart and Aging Research in Genomic Epidemiology Consortium. Common variants at 12q14 and 12q24 are associated with hippocampal volume. Nat Genet. 2012 Apr 15;44(5):545-51. Doi: 10.1038/ng.2237. PMID: 22504421; PMCID: PMC3427729.

Braskie MN, Jahanshad N, Stein JL, Barysheva M, Johnson K, McMahon KL, de Zubicaray GI, Martin NG, Wright MJ, Ringman JM, Toga AW, Thompson PM. Relationship of a variant in the NTRK1 gene to white matter microstructure in young adults. J Neurosci. 2012 Apr 25;32(17):5964-72. Doi: 10.1523/JNEUROSCI.5561-11.2012. PMID: 22539856; PMCID: PMC3393752.

Novak NM, Stein JL, Medland SE, Hibar DP, Thompson PM, Toga AW. EnigmaVis: online interactive visualization of genome-wide association studies of the Enhancing NeuroImaging Genetics through Meta-Analysis (ENIGMA) consortium. Twin Res Hum Genet. 2012 Jun;15(3):414-8. Doi: 10.1017/thg.2012.17. PMID: 22856375; PMCID: PMC3635713.

Hibar DP, Jahanshad N, Stein JL, Kohannim O, Toga AW, Medland SE, Hansell NK, McMahon KL, de Zubicaray GI, Montgomery GW, Martin NG, Wright MJ, Thompson PM. Alzheimer’s disease risk gene, GAB2, is associated with regional brain volume differences in 755 young healthy twins. Twin Res Hum Genet. 2012 Jun;15(3):286-95. Doi: 10.1017/thg.2012.15. PMID: 22856364; PMCID: PMC3785377.

Smit DJ, van ‘t Ent D, de Zubicaray G, Stein JL. Neuroimaging and genetics: exploring, searching, and finding. Twin Res Hum Genet. 2012 Jun;15(3):267-72. Doi: 10.1017/thg.2012.20. PMID: 22856362; PMCID: PMC3785366.

Kohannim O, Jahanshad N, Braskie MN, Stein JL, Chiang MC, Reese AH, Hibar DP, Toga AW, McMahon KL, de Zubicaray GI, Medland SE, Montgomery GW, Martin NG, Wright MJ, Thompson PM. Predicting white matter integrity from multiple common genetic variants. Neuropsychopharmacology. 2012 Aug;37(9):2012-9. Doi: 10.1038/npp.2012.49. Epub 2012 Apr 18. PMID: 22510721; PMCID: PMC3398730.

Kohannim O, Hibar DP, Stein JL, Jahanshad N, Hua X, Rajagopalan P, Toga AW, Jack CR Jr, Weiner MW, de Zubicaray GI, McMahon KL, Hansell NK, Martin NG, Wright MJ, Thompson PM; Alzheimer’s Disease Neuroimaging Initiative. Discovery and Replication of Gene Influences on Brain Structure Using LASSO Regression. Front Neurosci. 2012 Aug 6;6:115. Doi: 10.3389/fnins.2012.00115. PMID: 22888310; PMCID: PMC3412288.

Rajagopalan P, Jahanshad N, Stein JL, Hua X, Madsen SK, Kohannim O, Hibar DP, Toga AW, Jack CR Jr, Saykin AJ, Green RC, Weiner MW, Bis JC, Kuller LH, Riverol M, Becker JT, Lopez OL, Thompson PM; Alzheimer’s Disease Neuroimaging Initiative (ADNI); Cardiovascular Health Study (CHS). Common folate gene variant, MTHFR C677T, is associated with brain structure in two independent cohorts of people with mild cognitive impairment. Neuroimage Clin. 2012 Oct 4;1(1):179-87. Doi: 10.1016/j.nicl.2012.09.012. PMID: 24179750; PMCID: PMC3757723.

Stein JL, Parikshak NN, Geschwind DH. Rare inherited variation in autism: beginning to see the forest and a few trees. Neuron. 2013 Jan 23;77(2):209-11. Doi: 10.1016/j.neuron.2013.01.010. PMID: 23352155; PMCID: PMC3691080.

Colom R, Stein JL, Rajagopalan P, Martínez K, Hermel D, Wang Y, Álvarez-Linera J, Burgaleta M, Quiroga MÁ, Shih PC, Thompson PM. Hippocampal structure and human cognition: key role of spatial processing and evidence supporting the efficiency hypothesis in females. Intelligence. 2013 Mar;41(2):129-140. Doi: 10.1016/j.intell.2013.01.002. PMID: 25632167; PMCID: PMC4306583.

Hibar DP, Stein JL, Ryles AB, Kohannim O, Jahanshad N, Medland SE, Hansell NK, McMahon KL, de Zubicaray GI, Montgomery GW, Martin NG, Wright MJ, Saykin AJ, Jack CR Jr, Weiner MW, Toga AW, Thompson PM; Alzheimer’s Disease Neuroimaging Initiative. Genome-wide association identifies genetic variants associated with lentiform nucleus volume in N = 1345 young and elderly subjects. Brain Imaging Behav. 2013 Jun;7(2):102-15. Doi: 10.1007/s11682-012-9199-7. PMID: 22903471; PMCID: PMC3779070.

Berg JM, Lee C, Chen L, Galvan L, Cepeda C, Chen JY, Peñagarikano O, Stein JL, Li A, Oguro-Ando A, Miller JA, Vashisht AA, Starks ME, Kite EP, Tam E, Gdalyahu A, Al-Sharif NB, Burkett ZD, White SA, Fears SC, Levine MS, Wohlschlegel JA, Geschwind DH. JAKMIP1, a Novel Regulator of Neuronal Translation, Modulates Synaptic Function and Autistic-like Behaviors in Mouse. Neuron. 2015 Dec 16;88(6):1173-1191. Doi: 10.1016/j.neuron.2015.10.031. Epub 2015 Nov 25. PMID: 26627310; PMCID: PMC4829343.

Laughlin RE, Grant TL, Williams RW, Jentsch JD. Genetic dissection of behavioral flexibility: reversal learning in mice. Biol Psychiatry. 2011 Jun 1;69(11):1109-16. doi: 10.1016/j.biopsych.2011.01.014. Epub 2011 Mar 9. PMID: 21392734; PMCID: PMC3090526.

Ghazalpour A, Rau CD, Farber CR, Bennett BJ, Orozco LD, van Nas A, Pan C, Allayee H, Beaven SW, Civelek M, Davis RC, Drake TA, Friedman RA, Furlotte N, Hui ST, Jentsch JD, Kostem E, Kang HM, Kang EY, Joo JW, Korshunov VA, Laughlin RE, Martin LJ, Ohmen JD, Parks BW, Pellegrini M, Reue K, Smith DJ, Tetradis S, Wang J, Wang Y, Weiss JN, Kirchgessner T, Gargalovic PS, Eskin E, Lusis AJ, LeBoeuf RC. Hybrid mouse diversity panel: a panel of inbred mouse strains suitable for analysis of complex genetic traits. Mamm Genome. 2012 Oct;23(9-10):680-92. doi: 10.1007/s00335-012-9411-5. Epub 2012 Aug 15. PMID: 22892838; PMCID: PMC3586763.

Cervantes MC, Laughlin RE, Jentsch JD. Cocaine self-administration behavior in inbred mouse lines segregating different capacities for inhibitory control. Psychopharmacology (Berl). 2013 Oct;229(3):515-25. doi: 10.1007/s00213-013-3135-4. Epub 2013 May 17. PMID: 23681162; PMCID: PMC3770817.

Appointed 2004 - 2008

Burggren AC, Zeineh MM, Ekstrom AD, Braskie MN, Thompson PM, Small GW, Bookheimer SY. Reduced cortical thickness in hippocampal subregions among cognitively normal apolipoprotein E e4 carriers. Neuroimage. 2008 Jul 15;41(4):1177-83. doi: 10.1016/j.neuroimage.2008.03.039. Epub 2008 Apr 4. PMID: 18486492; PMCID: PMC2601686.

Braskie MN, Small GW, Bookheimer SY. Vascular health risks and fMRI activation during a memory task in older adults. Neurobiol Aging. 2010 Sep;31(9):1532-42. doi: 10.1016/j.neurobiolaging.2008.08.016. Epub 2008 Oct 1. PMID: 18829134; PMCID: PMC2965069.

Braskie MN, Klunder AD, Hayashi KM, Protas H, Kepe V, Miller KJ, Huang SC, Barrio JR, Ercoli LM, Siddarth P, Satyamurthy N, Liu J, Toga AW, Bookheimer SY, Small GW, Thompson PM. Plaque and tangle imaging and cognition in normal aging and Alzheimer’s disease. Neurobiol Aging. 2010 Oct;31(10):1669-78. doi: 10.1016/j.neurobiolaging.2008.09.012. Epub 2008 Nov 11. PMID: 19004525; PMCID: PMC2891885.

Braskie MN, Wilcox CE, Landau SM, O’Neil JP, Baker SL, Madison CM, Kluth JT, Jagust WJ. Relationship of striatal dopamine synthesis capacity to age and cognition. J Neurosci. 2008 Dec 24;28(52):14320-8. doi: 10.1523/JNEUROSCI.3729-08.2008. PMID: 19109513; PMCID: PMC2880923.

Braskie MN, Small GW, Bookheimer SY. Entorhinal cortex structure and functional MRI response during an associative verbal memory task. Hum Brain Mapp. 2009 Dec;30(12):3981-92. doi: 10.1002/hbm.20823. PMID: 19507155; PMCID: PMC2787760.

Protas HD, Huang SC, Kepe V, Hayashi K, Klunder A, Braskie MN, Ercoli L, Bookheimer S, Thompson PM, Small GW, Barrio JR. FDDNP binding using MR derived cortical surface maps. Neuroimage. 2010 Jan 1;49(1):240-8. doi: 10.1016/j.neuroimage.2009.08.035. Epub 2009 Aug 22. PMID: 19703569; PMCID: PMC2764817.

Wilcox CE, Braskie MN, Kluth JT, Jagust WJ. Overeating Behavior and Striatal Dopamine with 6-[F]-Fluoro-L-m-Tyrosine PET. J Obes. 2010;2010:909348. doi: 10.1155/2010/909348. Epub 2010 May 4. PMID: 20798859; PMCID: PMC2925447.

Cagigas, X.E., Salmon, D.P. & Filoteo, J.V. (2009). La Neuropsicologia de la Demencia [Neuropsychology of Dementia]. In M. Perez-Garcia (Ed.), Manual de Neuropsicologia Clinica. Madrid, Spain: Piramide.

Cole, M., & Cagigas, X.E. (2009). Culture, Cognition, & Development. In M.H. Bornstein (Ed.), Handbook of Cross-cultural Developmental Science (pp. 127-142). New York, NY, US: Psychology Press.

Cagigas, X.E., & Bilder, R.M. (2009). Where culture meets neuroimaging: The intersection of Luria’s method with modern neuroimaging and cognitive neuroscience research. In A.L. Christensen, D. Bougakov, E. Goldberg (Eds.), Luria’s Legacy in the 21st Century (pp. 23-29). New York, NY, US: Oxford University Press.

Congdon E, Constable RT, Lesch KP, Canli T. Influence of SLC6A3 and COMT variation on neural activation during response inhibition. Biol Psychol. 2009 Jul;81(3):144-52. doi: 10.1016/j.biopsycho.2009.03.005. Epub 2009 Mar 28. PMID: 19482231; PMCID: PMC2689843.

Dougherty LR, Klein DN, Congdon E, Canli T, Hayden EP. Interaction between 5-HTTLPR and BDNF Val66Met polymorphisms on HPA axis reactivity in preschoolers. Biol Psychol. 2010 Feb;83(2):93-100. doi: 10.1016/j.biopsycho.2009.10.009. Epub 2009 Nov 13. PMID: 19914329; PMCID: PMC2822020.

Lenartowicz, A., Kalar, D., Congdon E., & Poldrack, R. Towards an ontology of cognitive control. Topics in Cognitive Science. Top Cogn Sci. 2010 Oct;2(4):678-92. doi: 10.1111/j.1756-8765.2010.01100.x. PMID: 25164049.

Congdon E, Poldrack RA, Freimer NB. Neurocognitive phenotypes and genetic dissection of disorders of brain and behavior. Neuron. 2010 Oct 21;68(2):218-30. doi: 10.1016/j.neuron.2010.10.007. PMID: 20955930; PMCID: PMC4123421.

Congdon E, Mumford JA, Cohen JR, Galvan A, Aron AR, Xue G, Miller E, Poldrack RA. Engagement of large-scale networks is related to individual differences in inhibitory control. Neuroimage. 2010 Nov 1;53(2):653-63. doi: 10.1016/j.neuroimage.2010.06.062. Epub 2010 Jun 30. PMID: 20600962; PMCID: PMC2930099.

Pietiläinen OP, Rehnström K, Jakkula E, Service SK, Congdon E, Tilgmann C, Hartikainen AL, Taanila A, Heikura U, Paunio T, Ripatti S, Jarvelin MR, Isohanni M, Sabatti C, Palotie A, Freimer NB, Peltonen L. Phenotype mining in CNV carriers from a population cohort. Hum Mol Genet. 2011 Jul 1;20(13):2686-95. doi: 10.1093/hmg/ddr162. Epub 2011 Apr 19. PMID: 21505072; PMCID: PMC3110003.

Congdon E, Mumford JA, Cohen JR, Galvan A, Canli T, Poldrack RA. Measurement and reliability of response inhibition. Front Psychol. 2012 Feb 21;3:37. doi: 10.3389/fpsyg.2012.00037. PMID: 22363308; PMCID: PMC3283117.

Service SK, Verweij KJ, Lahti J, Congdon E, Ekelund J, Hintsanen M, Räikkönen K, Lehtimäki T, Kähönen M, Widen E, Taanila A, Veijola J, Heath AC, Madden PA, Montgomery GW, Sabatti C, Järvelin MR, Palotie A, Raitakari O, Viikari J, Martin NG, Eriksson JG, Keltikangas-Järvinen L, Wray NR, Freimer NB. A genome-wide meta-analysis of association studies of Cloninger’s Temperament Scales. Transl Psychiatry. 2012 May 15;2(5):e116. doi: 10.1038/tp.2012.37. PMID: 22832960; PMCID: PMC3365256.

Congdon E, Service S, Wessman J, Seppänen JK, Schönauer S, Miettunen J, Turunen H, Koiranen M, Joukamaa M, Järvelin MR, Peltonen L, Veijola J, Mannila H, Paunio T, Freimer NB. Early environment and neurobehavioral development predict adult temperament clusters. PLoS One. 2012;7(7):e38065. doi: 10.1371/journal.pone.0038065. Epub 2012 Jul 18. PMID: 22815688; PMCID: PMC3399831.

Wessman J, Schönauer S, Miettunen J, Turunen H, Parviainen P, Seppänen JK, Congdon E, Service S, Koiranen M, Ekelund J, Laitinen J, Taanila A, Tammelin T, Hintsanen M, Pulkki-Råback L, Keltikangas-Järvinen L, Viikari J, Raitakari OT, Joukamaa M, Järvelin MR, Freimer N, Peltonen L, Veijola J, Mannila H, Paunio T. Temperament clusters in a normal population: implications for health and disease. PLoS One. 2012;7(7):e33088. doi: 10.1371/journal.pone.0033088. Epub 2012 Jul 18. PMID: 22815673; PMCID: PMC3399883.

Fei H, Grygoruk A, Brooks ES, Chen A, Krantz DE. Trafficking of vesicular neurotransmitter transporters. Traffic. 2008 Sep;9(9):1425-36. doi: 10.1111/j.1600-0854.2008.00771.x. Epub 2008 May 26. PMID: 18507811; PMCID: PMC2897747.

Brooks ES, Greer CL, Romero-Calderón R, Serway CN, Grygoruk A, Haimovitz JM, Nguyen BT, Najibi R, Tabone CJ, de Belle JS, Krantz DE. A putative vesicular transporter expressed in Drosophila mushroom bodies that mediates sexual behavior may define a neurotransmitter system. Neuron. 2011 Oct 20;72(2):316-29. doi: 10.1016/j.neuron.2011.08.032. PMID: 22017990; PMCID: PMC3201771.

Karlsgodt KH, van Erp T, Poldrack R, Bearden C, Nuechterlein K, Cannon T (2008). Diffusion tensor imaging of the superior longitudinal fasciculus and working
memory in recent-onset schizophrenia. Biol Psychiatry 63(5): 512-8.

van Erp TG, Lesh TA, Knowlton BJ, Bearden CE, Hardt M, Karlsgodt KH, Shirinyan D, Rao V, Green MF, Subotnik KL, Nuechterlein K, Cannon TD. Remember and know judgments during recognition in chronic schizophrenia. Schizophr Res. 2008 Mar;100(1-3):181-90. doi: 10.1016/j.schres.2007.09.021. Epub 2007 Oct 26. PMID: 17964760; PMCID: PMC2517628.

Karlsgodt KH, Sun D, Jiminez AM, Lutkenhoff ES, Willhite R, van Erp TGM, Cannon TD (2008). Developmental disruptions in neural connectivity in the pathophysiology of schizophrenia, Development and Psychopathology, 20(4): 1297-327.

van Erp TG, Lesh TA, Knowlton BJ, Bearden CE, Hardt M, Karlsgodt KH, Shirinyan D, Rao V, Green MF, Subotnik KL, Nuechterlein K, Cannon TD. Remember and know judgments during recognition in chronic schizophrenia. Schizophr Res. 2008 Mar;100(1-3):181-90. doi: 10.1016/j.schres.2007.09.021. Epub 2007 Oct 26. PMID: 17964760; PMCID: PMC2517628.

Karlsgodt KH, Sanz J, van Erp TG, Bearden CE, Nuechterlein KH, Cannon TD. Re-evaluating dorsolateral prefrontal cortex activation during working memory in schizophrenia. Schizophr Res. 2009 Mar;108(1-3):143-50. doi: 10.1016/j.schres.2008.12.025. Epub 2009 Feb 3. PMID: 19196494; PMCID: PMC2671001.

Karlsgodt KH, Niendam TA, Bearden CE, Cannon TD. White matter integrity and prediction of social and role functioning in subjects at ultra-high risk for psychosis. Biol Psychiatry. 2009 Sep 15;66(6):562-9. doi: 10.1016/j.biopsych.2009.03.013. Epub 2009 May 7. PMID: 19423081; PMCID: PMC2805703.

Sanz JH, Karlsgodt KH, Bearden CE, van Erp TG, Nandy RR, Ventura J, Nuechterlein K, Cannon TD. Symptomatic and functional correlates of regional brain physiology during working memory processing in patients with recent onset schizophrenia. Psychiatry Res. 2009 Sep 30;173(3):177-82. doi: 10.1016/j.pscychresns.2009.02.008. Epub 2009 Aug 18. PMID: 19692211; PMCID: PMC2734873.

Karlsgodt KH, Kochunov P, Winkler AM, Laird AR, Almasy L, Duggirala R, Olvera RL, Fox PT, Blangero J, Glahn DC. A multimodal assessment of the genetic control over working memory. J Neurosci. 2010 Jun 16;30(24):8197-202. doi: 10.1523/JNEUROSCI.0359-10.2010. PMID: 20554870; PMCID: PMC2894480.

Shilyansky C, Karlsgodt KH, Cummings DM, Sidiropoulou K, Hardt M, James AS, Ehninger D, Bearden CE, Poirazi P, Jentsch JD, Cannon TD, Levine MS, Silva AJ. Neurofibromin regulates corticostriatal inhibitory networks during working memory performance. Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):13141-6. doi: 10.1073/pnas.1004829107. Epub 2010 Jul 12. PMID: 20624961; PMCID: PMC2919968.

Mittal VA, Karlsgodt K, Zinberg J, Cannon TD, Bearden CE. Identification and treatment of a pineal region tumor in an adolescent with prodromal psychotic symptoms. Am J Psychiatry. 2010 Sep;167(9):1033-7. doi: 10.1176/appi.ajp.2010.09071043. PMID: 20826854; PMCID: PMC4414088.

Karlsgodt KH, Robleto K, Trantham-Davidson H, Jairl C, Cannon TD, Lavin A, Jentsch JD. Reduced dysbindin expression mediates N-methyl-D-aspartate receptor hypofunction and impaired working memory performance. Biol Psychiatry. 2011 Jan 1;69(1):28-34. doi: 10.1016/j.biopsych.2010.09.012. Epub 2010 Oct 30. PMID: 21035792; PMCID: PMC4204919.

Kochunov P, Glahn DC, Lancaster J, Winkler A, Karlsgodt K, Olvera RL, Curran JE, Carless MA, Dyer TD, Almasy L, Duggirala R, Fox PT, Blangero J. Blood pressure and cerebral white matter share common genetic factors in Mexican Americans. Hypertension. 2011 Feb;57(2):330-5. doi: 10.1161/HYPERTENSIONAHA.110.162206. Epub 2010 Dec 6. PMID: 21135356; PMCID: PMC3024472.

Gee DG, Karlsgodt KH, van Erp TG, Bearden CE, Lieberman MD, Belger A, Perkins DO, Olvet DM, Cornblatt BA, Constable T, Woods SW, Addington J, Cadenhead KS, McGlashan TH, Seidman LJ, Tsuang MT, Walker EF, Cannon TD; NAPLS Consortium. Altered age-related trajectories of amygdala-prefrontal circuitry in adolescents at clinical high risk for psychosis: a preliminary study. Schizophr Res. 2012 Jan;134(1):1-9. doi: 10.1016/j.schres.2011.10.005. Epub 2011 Nov 6. PMID: 22056201; PMCID: PMC3245800.

Karlsgodt KH, Jacobson SC, Seal M, Fusar-Poli P. The relationship of developmental changes in white matter to the onset of psychosis. Curr Pharm Des. 2012;18(4):422-33. doi: 10.2174/138161212799316073. PMID: 22239573; PMCID: PMC7130450.

Lutkenhoff E, Karlsgodt KH, Stein J, Thompson P, Cannon TD, Jentsch JD, Structural and functional neuroimaging phenotypes in dysbindin mutant mice, Neuroimage. 2012 Aug 1;62(1):120-9. PMID: 22584233. PMCID in progress

Delgado JY, Coba M, Anderson CN, Thompson KR, Gray EE, Heusner CL, Martin KC, Grant SG, O’Dell TJ. NMDA receptor activation dephosphorylates AMPA receptor glutamate receptor 1 subunits at threonine 840. J Neurosci. 2007 Nov 28;27(48):13210-21. doi: 10.1523/JNEUROSCI.3056-07.2007. PMID: 18045915; PMCID: PMC2851143.

Heusner CL, Martin KC (2008). Signaling from the Synapse to the Nucleus, pp. 601-620
in Structural and Functional Organization of the Synapse, Michael Ehlers and
Johannes Hell (eds), Springer, New York.

Streb JW, Miano, J.M. (2005) AKAP12alpha : An atypical serum response factor-dependent target gene. J Biol Chem, 280 (6): 4125-34

Streb JW, Miano, J.M. (2005) Cross-species sequence analysis reveals multiple charged residue-rich domains that regulate nuclear/cytoplasmic partitioning and membrane localization of AKAP 12 (SSeCKS/Gravin). J Biol Chem, 280 (30): 28007-14.

Sun Q, Chen G, Streb JW, Long X, Yang Y, Stoeckert CJ Jr, Miano JM. Defining the mammalian CarGome. Genome Res. 2006 Feb;16(2):197-207. Doi: 10.1101/gr.4108706. Epub 2005 Dec 19. PMID: 16365378; PMCID: PMC1361715.

Lee TD, Streb JW, Georger MA, Miano JM. (2006) Tissue Expression of the Novel Serine Carboxypeptidase Scpep1. J Histochem Cyotchem, 54 (6): 701-11.

Chow N, Bell RD, Deane R, Streb JW, Chen J, Brooks A, Van Nostrand W, Miano JM, Zlokovic BV. Serum response factor and myocardin mediate arterial hypercontractility and cerebral blood flow dysregulation in Alzheimer’s phenotype. Proc Natl Acad Sci U S A. 2007 Jan 16;104(3):823-8. Doi: 10.1073/pnas.0608251104. Epub 2007 Jan 10. PMID: 17215356; PMCID: PMC1783398.

Choi MC, Lee YU, Kim SH, Lee JH, Park JH, Streb JW, Oh DY, Im SA, Kim TY, Jong HS, Bang YJ. (2008) Overexpression of A-kinase anchoring protein 12a activates sterol regulatory element binding protein-2 and enhances cholesterol efflux in hepatic cells. Int J Biochem Cell Biol 40(11): 2534-43.

Bell RD, Deane R, Chow N, Long X, Sagare A, Singh I, Streb JW, Guo H, Rubio A, Van Nostrand W, Miano JM, Zlokovic BV. SRF and myocardin regulate LRP-mediated amyloid-beta clearance in brain vascular cells. Nat Cell Biol. 2009 Feb;11(2):143-53. Doi: 10.1038/ncb1819. Epub 2008 Dec 21. PMID: 19098903; PMCID: PMC2654279.

Sang TK, Chang HY, Lawless GM, Ratnaparkhi A, Mee L, Ackerson LC, Maidment NT, Krantz DE, Jackson GR. A Drosophila model of mutant human parkin-induced toxicity demonstrates selective loss of dopaminergic neurons and dependence on cellular dopamine. J Neurosci. 2007 Jan 31;27(5):981-92. doi: 10.1523/JNEUROSCI.4810-06.2007. PMID: 17267552; PMCID: PMC6673194.

Keen-Kim D, Grody WW, Richards CS. Microelectronic array system for molecular diagnostic genotyping: Nanogen NanoChip 400 and molecular biology workstation. Expert Rev Mol Diagn. 2006 May;6(3):287-94. Doi: 10.1586/14737159.6.3.287. PMID: 16706733.

Keen-Kim D, Freimer NB. Genetics and epidemiology of Tourette syndrome. J Child Neurol. 2006 Aug;21(8):665-71. Doi: 10.1177/08830738060210081101. PMID: 16970867.

Keen-Kim D, Mathews CA, Reus VI, Lowe TL, Herrera LD, Budman CL, Gross-Tsur V, Pulver AE, Bruun RD, Erenberg G, Naarden A, Sabatti C, Freimer NB. Overrepresentation of rare variants in a specific ethnic group may confuse interpretation of association analyses. Hum Mol Genet. 2006 Nov 15;15(22):3324-8. Doi: 10.1093/hmg/ddl408. Epub 2006 Oct 11. PMID: 17035247.

Keen-Kim D, Nooraie F, Rao PN. Cytogenetic biomarkers for human cancer. Front Biosci. 2008 May 1;13:5928-49. Doi: 10.2741/3127. PMID: 18508633.

Dougherty JD, Garcia AD, Nakano I, Livingstone M, Norris B, Polakiewicz R, Wexler EM, Sofroniew MV, Kornblum HI, Geschwind DH. PBK/TOPK, a proliferating neural progenitor-specific mitogen-activated protein kinase kinase. J Neurosci. 2005 Nov 16;25(46):10773-85. Doi: 10.1523/JNEUROSCI.3207-05.2005. PMID: 16291951; PMCID: PMC6725850.

Coppola G, Choi SH, Santos MM, Miranda CJ, Tentler D, Wexler EM, Pandolfo M, Geschwind DH. Gene expression profiling in frataxin deficient mice: microarray evidence for significant expression changes without detectable neurodegeneration. Neurobiol Dis. 2006 May;22(2):302-11. Doi: 10.1016/j.nbd.2005.11.014. Epub 2006 Jan 25. PMID: 16442805; PMCID: PMC2886035.

Wexler EM, Paucer A, Kornblum HI, Palmer TD, Geschwind DH. Endogenous Wnt signaling maintains neural progenitor cell potency. Stem Cells. 2009 May;27(5):1130-41. Doi: 10.1002/stem.36. Erratum in: Stem Cells. 2009 Oct;27(10):2636. Plamer, Theodore D [corrected to Palmer, Theodore D]. PMID: 19418460; PMCID: PMC2782960.

Nakano I, Joshi K, Visnyei K, Hu B, Watanabe M, Lam D, Wexler E, Saigusa K, Nakamura Y, Laks DR, Mischel PS, Viapiano M, Kornblum HI. Siomycin A targets brain tumor stem cells partially through a MELK-mediated pathway. Neuro Oncol. 2011 Jun;13(6):622-34. Doi: 10.1093/neuonc/nor023. Epub 2011 May 9. PMID: 21558073; PMCID: PMC3107094.

Mukamel Z, Konopka G, Wexler E, Osborn GE, Dong H, Bergman MY, Levitt P, Geschwind DH. Regulation of MET by FOXP2, genes implicated in higher cognitive dysfunction and autism risk. J Neurosci. 2011 Aug 10;31(32):11437-42. Doi: 10.1523/JNEUROSCI.0181-11.2011. PMID: 21832174; PMCID: PMC3667610.

Rosen EY, Wexler EM, Versano R, Coppola G, Gao F, Winden KD, Oldham MC, Martens LH, Zhou P, Farese RV Jr, Geschwind DH. Functional genomic analyses identify pathways dysregulated by progranulin deficiency, implicating Wnt signaling. Neuron. 2011 Sep 22;71(6):1030-42. Doi: 10.1016/j.neuron.2011.07.021. Epub 2011 Sep 21. PMID: 21943601; PMCID: PMC3633414.

Wexler EM, Rosen E, Lu D, Osborn GE, Martin E, Raybould H, Geschwind DH. Genome-wide analysis of a Wnt1-regulated transcriptional network implicates neurodegenerative pathways. Sci Signal. 2011 Oct 4;4(193):ra65. Doi: 10.1126/scisignal.2002282. PMID: 21971039; PMCID: PMC3856943.

Wexler E, Fogel BL. Psychosis in Sinocerebellar Ataxia Type 10. Am J Psychiatry. 2011. 168(12):1339-40.PMCID: 22193677.

Wexler EM, Geschwind DH. DISC1: a schizophrenia gene with multiple personalities. Neuron. 2011 Nov 17;72(4):501-3. Doi: 10.1016/j.neuron.2011.10.023.
PMID: 22099453. PMCID in progress

Konopka G, Wexler E, Rosen E, Mukamel Z, Osborn GE, Chen L, Lu D, Gao F, Gao K, Lowe JK, Geschwind DH. Modeling the functional genomics of autism using human neurons. Mol Psychiatry. 2012 Feb;17(2):202-14. Doi: 10.1038/mp.2011.60. Epub 2011 Jun 7. PMID: 21647150; PMCID: PMC3170664.

Fogel BL, Wexler E, Wahnich A, Friedrich T, Vijayendran C, Gao F, Parikshak N, Konopka G, Geschwind DH. RBFOX1 regulates both splicing and transcriptional networks in human neuronal development. Hum Mol Genet. 2012 Oct 1;21(19):4171-86. Doi: 10.1093/hmg/dds240. Epub 2012 Jun 23. PMID: 22730494; PMCID: PMC3441119.

Ganguly A, Feldman RM, Guo M (2008). Ubiquilin antagonizes presenilin and promotes neurodegeneration in Drosophila. Hum Mol Genet 17(2):293-302. PMID: 17947293

Gross GG, Feldman RM, Ganguly A, Wang J, Yu H, Guo M. Role of X11 and ubiquilin as in vivo regulators of the amyloid precursor protein in Drosophila. PloS One. 2008 Jun 25;3(6):e2495. Doi: 10.1371/journal.pone.0002495. PMID: 18575606; PMCID: PMC2429963.

Gale GD, Anagnostaras SG, Godsil BP, Mitchell S, Nozawa T, Sage JR, Wiltgen B, Fanselow MS. Role of the basolateral amygdala in the storage of fear memories across the adult lifetime of rats. J Neurosci. 2004 Apr 14;24(15):3810-5. doi: 10.1523/JNEUROSCI.4100-03.2004. PMID: 15084662; PMCID: PMC6729345.

Schwetz I, McRoberts JA, Coutinho SV, Bradesi S, Gale GD, Fanselow M, Million M, Ohning G, Taché Y, Plotsky PM, Mayer EA (2005). Corticotropin-releasing factor receptor 1 mediates acute and delayed stress-induced visceral hyperalgesia in maternally separated Long-Evans rats. Am J Physiol Gastrointest Liver Physiol 289(4):G704-12. Epub 2005 Jun 30.

Gale GD, Yazdi RD, Khan AH, Lusis AJ, Davis RC, Smith DJ. A genome-wide panel of congenic mice reveals widespread epistasis of behavior quantitative trait loci. Mol Psychiatry. 2009 Jun;14(6):631-45. doi: 10.1038/mp.2008.4. Epub 2008 Apr 1. PMID: 18379576; PMCID: PMC3014058.

Skip to content